Protein–RNA interactions for Protein: Q8CDW1

Fam228a, Protein FAM228A, mousemouse

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam228aQ8CDW1 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Fam228aQ8CDW1 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC17.61■□□□□ 0.41
Fam228aQ8CDW1 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Fam228aQ8CDW1 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Fam228aQ8CDW1 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Fam228aQ8CDW1 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Fam228aQ8CDW1 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Fam228aQ8CDW1 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Fam228aQ8CDW1 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Fam228aQ8CDW1 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Fam228aQ8CDW1 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Fam228aQ8CDW1 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
Fam228aQ8CDW1 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Fam228aQ8CDW1 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Fam228aQ8CDW1 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Fam228aQ8CDW1 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Fam228aQ8CDW1 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC17.6■□□□□ 0.41
Fam228aQ8CDW1 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Fam228aQ8CDW1 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Fam228aQ8CDW1 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Fam228aQ8CDW1 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Fam228aQ8CDW1 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
Fam228aQ8CDW1 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Fam228aQ8CDW1 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Fam228aQ8CDW1 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Fam228aQ8CDW1 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Fam228aQ8CDW1 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Fam228aQ8CDW1 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Fam228aQ8CDW1 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Fam228aQ8CDW1 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Fam228aQ8CDW1 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Fam228aQ8CDW1 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Fam228aQ8CDW1 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Fam228aQ8CDW1 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
Fam228aQ8CDW1 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Fam228aQ8CDW1 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Fam228aQ8CDW1 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC17.59■□□□□ 0.41
Fam228aQ8CDW1 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Fam228aQ8CDW1 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC17.59■□□□□ 0.41
Fam228aQ8CDW1 Gm8495-201ENSMUST00000188740 694 ntBASIC17.59■□□□□ 0.41
Fam228aQ8CDW1 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC17.59■□□□□ 0.41
Fam228aQ8CDW1 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC17.59■□□□□ 0.41
Fam228aQ8CDW1 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Fam228aQ8CDW1 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Fam228aQ8CDW1 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Fam228aQ8CDW1 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Fam228aQ8CDW1 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Fam228aQ8CDW1 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC17.59■□□□□ 0.41
Fam228aQ8CDW1 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Fam228aQ8CDW1 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Fam228aQ8CDW1 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Fam228aQ8CDW1 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Fam228aQ8CDW1 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Fam228aQ8CDW1 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Fam228aQ8CDW1 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
Fam228aQ8CDW1 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Fam228aQ8CDW1 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Fam228aQ8CDW1 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Fam228aQ8CDW1 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Fam228aQ8CDW1 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Fam228aQ8CDW1 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Fam228aQ8CDW1 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Fam228aQ8CDW1 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Fam228aQ8CDW1 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Fam228aQ8CDW1 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Fam228aQ8CDW1 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Fam228aQ8CDW1 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Fam228aQ8CDW1 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Fam228aQ8CDW1 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
Fam228aQ8CDW1 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Fam228aQ8CDW1 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Fam228aQ8CDW1 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Fam228aQ8CDW1 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Fam228aQ8CDW1 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Fam228aQ8CDW1 Gm24841-201ENSMUST00000158676 357 ntBASIC17.58■□□□□ 0.4
Fam228aQ8CDW1 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Fam228aQ8CDW1 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC17.58■□□□□ 0.4
Fam228aQ8CDW1 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Fam228aQ8CDW1 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC17.58■□□□□ 0.4
Fam228aQ8CDW1 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Fam228aQ8CDW1 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
Fam228aQ8CDW1 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Fam228aQ8CDW1 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Fam228aQ8CDW1 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Fam228aQ8CDW1 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Fam228aQ8CDW1 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Fam228aQ8CDW1 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Fam228aQ8CDW1 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Fam228aQ8CDW1 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Fam228aQ8CDW1 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Fam228aQ8CDW1 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Fam228aQ8CDW1 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Fam228aQ8CDW1 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Fam228aQ8CDW1 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Fam228aQ8CDW1 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Fam228aQ8CDW1 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Fam228aQ8CDW1 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Fam228aQ8CDW1 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Fam228aQ8CDW1 Gm12382-201ENSMUST00000122005 922 ntBASIC17.57■□□□□ 0.4
Fam228aQ8CDW1 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms