Protein–RNA interactions for Protein: Q8CDV4

Trim52, Tripartite motif-containing 52, mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim52Q8CDV4 Rps4l-201ENSMUST00000071745 943 ntBASIC20.62■□□□□ 0.89
Trim52Q8CDV4 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim52Q8CDV4 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim52Q8CDV4 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Trim52Q8CDV4 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Trim52Q8CDV4 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Trim52Q8CDV4 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim52Q8CDV4 Gm44832-201ENSMUST00000208849 2303 ntBASIC20.61■□□□□ 0.89
Trim52Q8CDV4 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Trim52Q8CDV4 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Trim52Q8CDV4 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trim52Q8CDV4 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trim52Q8CDV4 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC20.61■□□□□ 0.89
Trim52Q8CDV4 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC20.61■□□□□ 0.89
Trim52Q8CDV4 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC20.61■□□□□ 0.89
Trim52Q8CDV4 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Trim52Q8CDV4 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Trim52Q8CDV4 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim52Q8CDV4 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim52Q8CDV4 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Trim52Q8CDV4 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Trim52Q8CDV4 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Trim52Q8CDV4 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim52Q8CDV4 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC20.6■□□□□ 0.89
Trim52Q8CDV4 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
Trim52Q8CDV4 Gm44357-201ENSMUST00000195897 142 ntBASIC20.6■□□□□ 0.89
Trim52Q8CDV4 Gm19658-201ENSMUST00000196231 138 ntBASIC20.6■□□□□ 0.89
Trim52Q8CDV4 Gm44367-201ENSMUST00000196836 138 ntBASIC20.6■□□□□ 0.89
Trim52Q8CDV4 Gm44350-201ENSMUST00000197197 138 ntBASIC20.6■□□□□ 0.89
Trim52Q8CDV4 Gm44390-201ENSMUST00000197533 144 ntBASIC20.6■□□□□ 0.89
Trim52Q8CDV4 Gm44313-201ENSMUST00000198018 138 ntBASIC20.6■□□□□ 0.89
Trim52Q8CDV4 Gm44486-201ENSMUST00000198508 138 ntBASIC20.6■□□□□ 0.89
Trim52Q8CDV4 Gm44314-201ENSMUST00000199263 138 ntBASIC20.6■□□□□ 0.89
Trim52Q8CDV4 Gm44394-201ENSMUST00000199558 138 ntBASIC20.6■□□□□ 0.89
Trim52Q8CDV4 Gm44484-201ENSMUST00000199873 138 ntBASIC20.6■□□□□ 0.89
Trim52Q8CDV4 Gm44466-201ENSMUST00000200264 138 ntBASIC20.6■□□□□ 0.89
Trim52Q8CDV4 Gm44359-201ENSMUST00000200671 138 ntBASIC20.6■□□□□ 0.89
Trim52Q8CDV4 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim52Q8CDV4 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
Trim52Q8CDV4 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim52Q8CDV4 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim52Q8CDV4 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim52Q8CDV4 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC20.59■□□□□ 0.89
Trim52Q8CDV4 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim52Q8CDV4 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim52Q8CDV4 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Trim52Q8CDV4 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Trim52Q8CDV4 Gm13830-205ENSMUST00000201195 1155 ntBASIC20.59■□□□□ 0.89
Trim52Q8CDV4 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC20.59■□□□□ 0.89
Trim52Q8CDV4 Gm6296-201ENSMUST00000222599 943 ntBASIC20.59■□□□□ 0.89
Trim52Q8CDV4 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim52Q8CDV4 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Trim52Q8CDV4 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Trim52Q8CDV4 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim52Q8CDV4 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim52Q8CDV4 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim52Q8CDV4 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trim52Q8CDV4 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Trim52Q8CDV4 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trim52Q8CDV4 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trim52Q8CDV4 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Trim52Q8CDV4 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trim52Q8CDV4 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC20.58■□□□□ 0.89
Trim52Q8CDV4 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trim52Q8CDV4 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trim52Q8CDV4 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Trim52Q8CDV4 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Trim52Q8CDV4 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Trim52Q8CDV4 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
Trim52Q8CDV4 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Trim52Q8CDV4 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
Trim52Q8CDV4 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Trim52Q8CDV4 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Trim52Q8CDV4 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Trim52Q8CDV4 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
Trim52Q8CDV4 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Trim52Q8CDV4 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim52Q8CDV4 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim52Q8CDV4 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Trim52Q8CDV4 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim52Q8CDV4 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Trim52Q8CDV4 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim52Q8CDV4 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim52Q8CDV4 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim52Q8CDV4 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim52Q8CDV4 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC20.57■□□□□ 0.88
Trim52Q8CDV4 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Trim52Q8CDV4 AC114585.2-202ENSMUST00000228094 426 ntBASIC20.57■□□□□ 0.88
Trim52Q8CDV4 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim52Q8CDV4 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim52Q8CDV4 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
Trim52Q8CDV4 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trim52Q8CDV4 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trim52Q8CDV4 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Trim52Q8CDV4 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Trim52Q8CDV4 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trim52Q8CDV4 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trim52Q8CDV4 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Trim52Q8CDV4 Gm37811-201ENSMUST00000192416 2601 ntBASIC20.56■□□□□ 0.88
Trim52Q8CDV4 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms