Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Vcpip1Q8CDG3 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Vcpip1Q8CDG3 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Vcpip1Q8CDG3 Gm37055-201ENSMUST00000191866 133 ntBASIC17.98■□□□□ 0.47
Vcpip1Q8CDG3 Gm38027-201ENSMUST00000192315 235 ntBASIC17.98■□□□□ 0.47
Vcpip1Q8CDG3 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Vcpip1Q8CDG3 AC153881.1-201ENSMUST00000214448 284 ntBASIC17.98■□□□□ 0.47
Vcpip1Q8CDG3 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Vcpip1Q8CDG3 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Vcpip1Q8CDG3 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Vcpip1Q8CDG3 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Vcpip1Q8CDG3 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Vcpip1Q8CDG3 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Vcpip1Q8CDG3 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Vcpip1Q8CDG3 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Vcpip1Q8CDG3 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Vcpip1Q8CDG3 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Vcpip1Q8CDG3 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Vcpip1Q8CDG3 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Vcpip1Q8CDG3 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Vcpip1Q8CDG3 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Vcpip1Q8CDG3 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Vcpip1Q8CDG3 Mir1199-201ENSMUST00000117015 119 ntBASIC17.97■□□□□ 0.47
Vcpip1Q8CDG3 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Vcpip1Q8CDG3 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC17.97■□□□□ 0.47
Vcpip1Q8CDG3 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC17.97■□□□□ 0.47
Vcpip1Q8CDG3 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC17.97■□□□□ 0.47
Vcpip1Q8CDG3 Gm9731-201ENSMUST00000209480 747 ntBASIC17.97■□□□□ 0.47
Vcpip1Q8CDG3 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Vcpip1Q8CDG3 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Vcpip1Q8CDG3 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Vcpip1Q8CDG3 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Vcpip1Q8CDG3 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Vcpip1Q8CDG3 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Vcpip1Q8CDG3 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Vcpip1Q8CDG3 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Vcpip1Q8CDG3 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC17.96■□□□□ 0.47
Vcpip1Q8CDG3 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Vcpip1Q8CDG3 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Vcpip1Q8CDG3 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Vcpip1Q8CDG3 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Vcpip1Q8CDG3 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Vcpip1Q8CDG3 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Vcpip1Q8CDG3 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Vcpip1Q8CDG3 Gm12085-201ENSMUST00000119263 940 ntBASIC17.96■□□□□ 0.47
Vcpip1Q8CDG3 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Vcpip1Q8CDG3 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Vcpip1Q8CDG3 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Vcpip1Q8CDG3 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Vcpip1Q8CDG3 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Vcpip1Q8CDG3 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Vcpip1Q8CDG3 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Vcpip1Q8CDG3 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Vcpip1Q8CDG3 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Vcpip1Q8CDG3 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
Vcpip1Q8CDG3 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Vcpip1Q8CDG3 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Vcpip1Q8CDG3 AC069562.2-201ENSMUST00000224644 2146 ntBASIC17.95■□□□□ 0.46
Vcpip1Q8CDG3 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC17.95■□□□□ 0.46
Vcpip1Q8CDG3 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC17.95■□□□□ 0.46
Vcpip1Q8CDG3 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC17.95■□□□□ 0.46
Vcpip1Q8CDG3 Gm16042-201ENSMUST00000204813 1247 ntBASIC17.95■□□□□ 0.46
Vcpip1Q8CDG3 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
Vcpip1Q8CDG3 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC17.95■□□□□ 0.46
Vcpip1Q8CDG3 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Vcpip1Q8CDG3 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Vcpip1Q8CDG3 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Vcpip1Q8CDG3 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Vcpip1Q8CDG3 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
Vcpip1Q8CDG3 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Vcpip1Q8CDG3 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC17.95■□□□□ 0.46
Vcpip1Q8CDG3 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Vcpip1Q8CDG3 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Vcpip1Q8CDG3 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Vcpip1Q8CDG3 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Vcpip1Q8CDG3 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Vcpip1Q8CDG3 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Vcpip1Q8CDG3 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Vcpip1Q8CDG3 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Vcpip1Q8CDG3 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Vcpip1Q8CDG3 Gm7638-201ENSMUST00000121348 967 ntBASIC17.94■□□□□ 0.46
Vcpip1Q8CDG3 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Vcpip1Q8CDG3 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Vcpip1Q8CDG3 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Vcpip1Q8CDG3 Il3ra-202ENSMUST00000223589 738 ntBASIC17.94■□□□□ 0.46
Vcpip1Q8CDG3 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Vcpip1Q8CDG3 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Vcpip1Q8CDG3 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Vcpip1Q8CDG3 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Vcpip1Q8CDG3 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Vcpip1Q8CDG3 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.93■□□□□ 0.46
Vcpip1Q8CDG3 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vcpip1Q8CDG3 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vcpip1Q8CDG3 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vcpip1Q8CDG3 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vcpip1Q8CDG3 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Vcpip1Q8CDG3 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Vcpip1Q8CDG3 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vcpip1Q8CDG3 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Vcpip1Q8CDG3 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms