Protein–RNA interactions for Protein: Q8C7N7

Aph1b, Gamma-secretase subunit APH-1B, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Aph1bQ8C7N7 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Aph1bQ8C7N7 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC16.56■□□□□ 0.24
Aph1bQ8C7N7 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Aph1bQ8C7N7 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Aph1bQ8C7N7 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
Aph1bQ8C7N7 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Aph1bQ8C7N7 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Aph1bQ8C7N7 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Aph1bQ8C7N7 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Aph1bQ8C7N7 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Aph1bQ8C7N7 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Aph1bQ8C7N7 AC154855.1-201ENSMUST00000227353 1458 ntBASIC16.55■□□□□ 0.24
Aph1bQ8C7N7 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Aph1bQ8C7N7 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC16.55■□□□□ 0.24
Aph1bQ8C7N7 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Aph1bQ8C7N7 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Aph1bQ8C7N7 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Aph1bQ8C7N7 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Aph1bQ8C7N7 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC16.55■□□□□ 0.24
Aph1bQ8C7N7 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Aph1bQ8C7N7 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC16.55■□□□□ 0.24
Aph1bQ8C7N7 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Aph1bQ8C7N7 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC16.55■□□□□ 0.24
Aph1bQ8C7N7 AC154649.1-201ENSMUST00000227392 384 ntBASIC16.55■□□□□ 0.24
Aph1bQ8C7N7 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Aph1bQ8C7N7 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Aph1bQ8C7N7 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Aph1bQ8C7N7 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Aph1bQ8C7N7 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Aph1bQ8C7N7 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Aph1bQ8C7N7 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
Aph1bQ8C7N7 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Aph1bQ8C7N7 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC16.55■□□□□ 0.24
Aph1bQ8C7N7 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Aph1bQ8C7N7 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
Aph1bQ8C7N7 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Aph1bQ8C7N7 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Aph1bQ8C7N7 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Aph1bQ8C7N7 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Aph1bQ8C7N7 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
Aph1bQ8C7N7 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Aph1bQ8C7N7 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Aph1bQ8C7N7 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC16.54■□□□□ 0.24
Aph1bQ8C7N7 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Aph1bQ8C7N7 Gm3375-201ENSMUST00000203929 796 ntBASIC16.54■□□□□ 0.24
Aph1bQ8C7N7 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Aph1bQ8C7N7 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Aph1bQ8C7N7 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Aph1bQ8C7N7 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Aph1bQ8C7N7 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC16.54■□□□□ 0.24
Aph1bQ8C7N7 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC16.54■□□□□ 0.24
Aph1bQ8C7N7 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Aph1bQ8C7N7 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Aph1bQ8C7N7 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Aph1bQ8C7N7 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Aph1bQ8C7N7 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Aph1bQ8C7N7 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Aph1bQ8C7N7 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Aph1bQ8C7N7 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC16.54■□□□□ 0.24
Aph1bQ8C7N7 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Aph1bQ8C7N7 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC16.53■□□□□ 0.24
Aph1bQ8C7N7 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Aph1bQ8C7N7 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Aph1bQ8C7N7 Gm715-201ENSMUST00000117865 831 ntBASIC16.53■□□□□ 0.24
Aph1bQ8C7N7 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Aph1bQ8C7N7 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Aph1bQ8C7N7 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC16.53■□□□□ 0.24
Aph1bQ8C7N7 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Aph1bQ8C7N7 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC16.53■□□□□ 0.24
Aph1bQ8C7N7 AC156016.1-201ENSMUST00000227190 1035 ntBASIC16.53■□□□□ 0.24
Aph1bQ8C7N7 Odf3b-204ENSMUST00000227834 930 ntBASIC16.53■□□□□ 0.24
Aph1bQ8C7N7 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Aph1bQ8C7N7 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Aph1bQ8C7N7 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Aph1bQ8C7N7 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Aph1bQ8C7N7 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Aph1bQ8C7N7 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Aph1bQ8C7N7 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Aph1bQ8C7N7 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC16.52■□□□□ 0.24
Aph1bQ8C7N7 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Aph1bQ8C7N7 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.24
Aph1bQ8C7N7 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Aph1bQ8C7N7 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Aph1bQ8C7N7 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Aph1bQ8C7N7 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Aph1bQ8C7N7 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC16.52■□□□□ 0.24
Aph1bQ8C7N7 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC16.52■□□□□ 0.24
Aph1bQ8C7N7 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
Aph1bQ8C7N7 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Aph1bQ8C7N7 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Aph1bQ8C7N7 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Aph1bQ8C7N7 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Aph1bQ8C7N7 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Aph1bQ8C7N7 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Aph1bQ8C7N7 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Aph1bQ8C7N7 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Aph1bQ8C7N7 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Aph1bQ8C7N7 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Aph1bQ8C7N7 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Aph1bQ8C7N7 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 75.4 ms