Protein–RNA interactions for Protein: Q8C2E4

Ptcd1, Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

Known RBP Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1Q8C2E4 Mir5131-201ENSMUST00000175426 93 ntBASIC20.54■□□□□ 0.88
Ptcd1Q8C2E4 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Ptcd1Q8C2E4 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ptcd1Q8C2E4 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ptcd1Q8C2E4 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC20.54■□□□□ 0.88
Ptcd1Q8C2E4 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ptcd1Q8C2E4 AC122335.2-201ENSMUST00000213901 6181 ntBASIC20.54■□□□□ 0.88
Ptcd1Q8C2E4 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ptcd1Q8C2E4 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ptcd1Q8C2E4 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ptcd1Q8C2E4 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
Ptcd1Q8C2E4 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Ptcd1Q8C2E4 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ptcd1Q8C2E4 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ptcd1Q8C2E4 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ptcd1Q8C2E4 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Ptcd1Q8C2E4 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC20.53■□□□□ 0.88
Ptcd1Q8C2E4 Gm6296-201ENSMUST00000222599 943 ntBASIC20.53■□□□□ 0.88
Ptcd1Q8C2E4 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ptcd1Q8C2E4 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Ptcd1Q8C2E4 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ptcd1Q8C2E4 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ptcd1Q8C2E4 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Ptcd1Q8C2E4 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC20.53■□□□□ 0.88
Ptcd1Q8C2E4 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Ptcd1Q8C2E4 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Ptcd1Q8C2E4 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ptcd1Q8C2E4 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ptcd1Q8C2E4 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ptcd1Q8C2E4 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ptcd1Q8C2E4 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ptcd1Q8C2E4 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Ptcd1Q8C2E4 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Ptcd1Q8C2E4 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ptcd1Q8C2E4 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ptcd1Q8C2E4 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC20.52■□□□□ 0.88
Ptcd1Q8C2E4 Gm43808-201ENSMUST00000202534 2065 ntBASIC20.52■□□□□ 0.88
Ptcd1Q8C2E4 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ptcd1Q8C2E4 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ptcd1Q8C2E4 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ptcd1Q8C2E4 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Ptcd1Q8C2E4 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC20.52■□□□□ 0.88
Ptcd1Q8C2E4 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ptcd1Q8C2E4 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ptcd1Q8C2E4 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Ptcd1Q8C2E4 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC20.52■□□□□ 0.88
Ptcd1Q8C2E4 Cmtm5-203ENSMUST00000227441 610 ntBASIC20.52■□□□□ 0.88
Ptcd1Q8C2E4 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ptcd1Q8C2E4 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ptcd1Q8C2E4 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ptcd1Q8C2E4 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Ptcd1Q8C2E4 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Ptcd1Q8C2E4 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.87
Ptcd1Q8C2E4 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC20.51■□□□□ 0.87
Ptcd1Q8C2E4 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ptcd1Q8C2E4 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Ptcd1Q8C2E4 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ptcd1Q8C2E4 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ptcd1Q8C2E4 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Ptcd1Q8C2E4 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ptcd1Q8C2E4 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ptcd1Q8C2E4 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC20.51■□□□□ 0.87
Ptcd1Q8C2E4 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ptcd1Q8C2E4 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ptcd1Q8C2E4 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ptcd1Q8C2E4 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ptcd1Q8C2E4 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ptcd1Q8C2E4 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Ptcd1Q8C2E4 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ptcd1Q8C2E4 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ptcd1Q8C2E4 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ptcd1Q8C2E4 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ptcd1Q8C2E4 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC20.5■□□□□ 0.87
Ptcd1Q8C2E4 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC20.5■□□□□ 0.87
Ptcd1Q8C2E4 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC20.5■□□□□ 0.87
Ptcd1Q8C2E4 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ptcd1Q8C2E4 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ptcd1Q8C2E4 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Ptcd1Q8C2E4 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ptcd1Q8C2E4 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ptcd1Q8C2E4 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ptcd1Q8C2E4 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ptcd1Q8C2E4 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Ptcd1Q8C2E4 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ptcd1Q8C2E4 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Ptcd1Q8C2E4 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC20.49■□□□□ 0.87
Ptcd1Q8C2E4 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC20.49■□□□□ 0.87
Ptcd1Q8C2E4 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Ptcd1Q8C2E4 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC20.49■□□□□ 0.87
Ptcd1Q8C2E4 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC20.49■□□□□ 0.87
Ptcd1Q8C2E4 Gm43332-201ENSMUST00000202511 1044 ntBASIC20.49■□□□□ 0.87
Ptcd1Q8C2E4 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC20.49■□□□□ 0.87
Ptcd1Q8C2E4 AC160338.1-201ENSMUST00000214232 705 ntBASIC20.49■□□□□ 0.87
Ptcd1Q8C2E4 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC20.49■□□□□ 0.87
Ptcd1Q8C2E4 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ptcd1Q8C2E4 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ptcd1Q8C2E4 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ptcd1Q8C2E4 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ptcd1Q8C2E4 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC20.49■□□□□ 0.87
Ptcd1Q8C2E4 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms