Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tsen54Q8C2A2 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Tsen54Q8C2A2 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC14.04□□□□□ -0.16
Tsen54Q8C2A2 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tsen54Q8C2A2 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tsen54Q8C2A2 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tsen54Q8C2A2 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tsen54Q8C2A2 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tsen54Q8C2A2 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tsen54Q8C2A2 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Tsen54Q8C2A2 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tsen54Q8C2A2 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tsen54Q8C2A2 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tsen54Q8C2A2 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tsen54Q8C2A2 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tsen54Q8C2A2 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tsen54Q8C2A2 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tsen54Q8C2A2 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Tsen54Q8C2A2 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tsen54Q8C2A2 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tsen54Q8C2A2 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tsen54Q8C2A2 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tsen54Q8C2A2 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Tsen54Q8C2A2 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tsen54Q8C2A2 Gm43859-201ENSMUST00000200075 1412 ntBASIC14.03□□□□□ -0.16
Tsen54Q8C2A2 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tsen54Q8C2A2 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC14.03□□□□□ -0.16
Tsen54Q8C2A2 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Tsen54Q8C2A2 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tsen54Q8C2A2 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tsen54Q8C2A2 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tsen54Q8C2A2 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tsen54Q8C2A2 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tsen54Q8C2A2 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
Tsen54Q8C2A2 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tsen54Q8C2A2 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tsen54Q8C2A2 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Tsen54Q8C2A2 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
Tsen54Q8C2A2 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Tsen54Q8C2A2 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Tsen54Q8C2A2 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Tsen54Q8C2A2 AC133083.1-201ENSMUST00000221736 2209 ntBASIC14.02□□□□□ -0.16
Tsen54Q8C2A2 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Tsen54Q8C2A2 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tsen54Q8C2A2 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Tsen54Q8C2A2 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC14.02□□□□□ -0.17
Tsen54Q8C2A2 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC14.02□□□□□ -0.17
Tsen54Q8C2A2 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC14.02□□□□□ -0.17
Tsen54Q8C2A2 AC122769.4-201ENSMUST00000228166 901 ntBASIC14.02□□□□□ -0.17
Tsen54Q8C2A2 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tsen54Q8C2A2 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tsen54Q8C2A2 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Tsen54Q8C2A2 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tsen54Q8C2A2 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tsen54Q8C2A2 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tsen54Q8C2A2 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tsen54Q8C2A2 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Tsen54Q8C2A2 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tsen54Q8C2A2 AC153526.5-201ENSMUST00000218661 2147 ntBASIC14.02□□□□□ -0.17
Tsen54Q8C2A2 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC14.02□□□□□ -0.17
Tsen54Q8C2A2 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.17
Tsen54Q8C2A2 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tsen54Q8C2A2 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Tsen54Q8C2A2 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Tsen54Q8C2A2 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tsen54Q8C2A2 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Tsen54Q8C2A2 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC14.01□□□□□ -0.17
Tsen54Q8C2A2 Gm16011-201ENSMUST00000121567 2662 ntBASIC14.01□□□□□ -0.17
Tsen54Q8C2A2 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Tsen54Q8C2A2 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tsen54Q8C2A2 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC14.01□□□□□ -0.17
Tsen54Q8C2A2 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
Tsen54Q8C2A2 Gm22325-201ENSMUST00000158904 308 ntBASIC14.01□□□□□ -0.17
Tsen54Q8C2A2 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC14.01□□□□□ -0.17
Tsen54Q8C2A2 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC14.01□□□□□ -0.17
Tsen54Q8C2A2 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tsen54Q8C2A2 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tsen54Q8C2A2 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC14.01□□□□□ -0.17
Tsen54Q8C2A2 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Tsen54Q8C2A2 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tsen54Q8C2A2 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tsen54Q8C2A2 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tsen54Q8C2A2 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tsen54Q8C2A2 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Tsen54Q8C2A2 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Tsen54Q8C2A2 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
Tsen54Q8C2A2 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Tsen54Q8C2A2 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC14□□□□□ -0.17
Tsen54Q8C2A2 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tsen54Q8C2A2 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tsen54Q8C2A2 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC14□□□□□ -0.17
Tsen54Q8C2A2 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Tsen54Q8C2A2 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC14□□□□□ -0.17
Tsen54Q8C2A2 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC14□□□□□ -0.17
Tsen54Q8C2A2 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC14□□□□□ -0.17
Tsen54Q8C2A2 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC14□□□□□ -0.17
Tsen54Q8C2A2 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tsen54Q8C2A2 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Tsen54Q8C2A2 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC14□□□□□ -0.17
Tsen54Q8C2A2 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 58.2 ms