Protein–RNA interactions for Protein: Q8BQP8

Rab11fip4, Rab11 family-interacting protein 4, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip4Q8BQP8 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rab11fip4Q8BQP8 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rab11fip4Q8BQP8 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rab11fip4Q8BQP8 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rab11fip4Q8BQP8 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rab11fip4Q8BQP8 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rab11fip4Q8BQP8 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rab11fip4Q8BQP8 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rab11fip4Q8BQP8 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rab11fip4Q8BQP8 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rab11fip4Q8BQP8 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rab11fip4Q8BQP8 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Rab11fip4Q8BQP8 Gm4217-201ENSMUST00000182243 1002 ntBASIC18.52■□□□□ 0.56
Rab11fip4Q8BQP8 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rab11fip4Q8BQP8 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC18.52■□□□□ 0.56
Rab11fip4Q8BQP8 Gm10819-201ENSMUST00000099988 561 ntBASIC18.52■□□□□ 0.56
Rab11fip4Q8BQP8 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rab11fip4Q8BQP8 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rab11fip4Q8BQP8 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Rab11fip4Q8BQP8 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rab11fip4Q8BQP8 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC18.52■□□□□ 0.56
Rab11fip4Q8BQP8 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
Rab11fip4Q8BQP8 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC18.52■□□□□ 0.55
Rab11fip4Q8BQP8 Gm11841-201ENSMUST00000117060 1963 ntBASIC18.51■□□□□ 0.55
Rab11fip4Q8BQP8 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Rab11fip4Q8BQP8 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rab11fip4Q8BQP8 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rab11fip4Q8BQP8 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rab11fip4Q8BQP8 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Rab11fip4Q8BQP8 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rab11fip4Q8BQP8 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rab11fip4Q8BQP8 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rab11fip4Q8BQP8 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC18.51■□□□□ 0.55
Rab11fip4Q8BQP8 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rab11fip4Q8BQP8 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rab11fip4Q8BQP8 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Rab11fip4Q8BQP8 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rab11fip4Q8BQP8 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Rab11fip4Q8BQP8 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rab11fip4Q8BQP8 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Rab11fip4Q8BQP8 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC18.51■□□□□ 0.55
Rab11fip4Q8BQP8 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rab11fip4Q8BQP8 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rab11fip4Q8BQP8 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rab11fip4Q8BQP8 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rab11fip4Q8BQP8 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rab11fip4Q8BQP8 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rab11fip4Q8BQP8 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rab11fip4Q8BQP8 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rab11fip4Q8BQP8 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Rab11fip4Q8BQP8 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rab11fip4Q8BQP8 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rab11fip4Q8BQP8 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC18.5■□□□□ 0.55
Rab11fip4Q8BQP8 Gm6345-202ENSMUST00000180900 204 ntBASIC18.5■□□□□ 0.55
Rab11fip4Q8BQP8 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rab11fip4Q8BQP8 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rab11fip4Q8BQP8 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rab11fip4Q8BQP8 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Rab11fip4Q8BQP8 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC18.5■□□□□ 0.55
Rab11fip4Q8BQP8 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rab11fip4Q8BQP8 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rab11fip4Q8BQP8 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rab11fip4Q8BQP8 Gm16401-202ENSMUST00000197463 2074 ntBASIC18.5■□□□□ 0.55
Rab11fip4Q8BQP8 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Rab11fip4Q8BQP8 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rab11fip4Q8BQP8 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rab11fip4Q8BQP8 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Rab11fip4Q8BQP8 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rab11fip4Q8BQP8 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Rab11fip4Q8BQP8 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rab11fip4Q8BQP8 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Rab11fip4Q8BQP8 Gm37025-201ENSMUST00000195159 829 ntBASIC18.49■□□□□ 0.55
Rab11fip4Q8BQP8 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rab11fip4Q8BQP8 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Rab11fip4Q8BQP8 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Rab11fip4Q8BQP8 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Rab11fip4Q8BQP8 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Rab11fip4Q8BQP8 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rab11fip4Q8BQP8 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Rab11fip4Q8BQP8 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Rab11fip4Q8BQP8 Gm11620-201ENSMUST00000118770 1845 ntBASIC18.49■□□□□ 0.55
Rab11fip4Q8BQP8 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Rab11fip4Q8BQP8 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rab11fip4Q8BQP8 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rab11fip4Q8BQP8 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Rab11fip4Q8BQP8 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rab11fip4Q8BQP8 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rab11fip4Q8BQP8 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Rab11fip4Q8BQP8 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rab11fip4Q8BQP8 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Rab11fip4Q8BQP8 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
Rab11fip4Q8BQP8 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
Rab11fip4Q8BQP8 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Rab11fip4Q8BQP8 Gm33142-201ENSMUST00000193913 867 ntBASIC18.48■□□□□ 0.55
Rab11fip4Q8BQP8 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rab11fip4Q8BQP8 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC18.48■□□□□ 0.55
Rab11fip4Q8BQP8 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Rab11fip4Q8BQP8 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Rab11fip4Q8BQP8 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rab11fip4Q8BQP8 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms