Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Chmp2bQ8BJF9 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Chmp2bQ8BJF9 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Chmp2bQ8BJF9 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Chmp2bQ8BJF9 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
Chmp2bQ8BJF9 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Chmp2bQ8BJF9 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Chmp2bQ8BJF9 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Chmp2bQ8BJF9 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Chmp2bQ8BJF9 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Chmp2bQ8BJF9 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC17.15■□□□□ 0.34
Chmp2bQ8BJF9 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Chmp2bQ8BJF9 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
Chmp2bQ8BJF9 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Chmp2bQ8BJF9 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Chmp2bQ8BJF9 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Chmp2bQ8BJF9 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC17.14■□□□□ 0.33
Chmp2bQ8BJF9 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Chmp2bQ8BJF9 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Chmp2bQ8BJF9 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Chmp2bQ8BJF9 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Chmp2bQ8BJF9 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Chmp2bQ8BJF9 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Chmp2bQ8BJF9 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Chmp2bQ8BJF9 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Chmp2bQ8BJF9 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Chmp2bQ8BJF9 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Chmp2bQ8BJF9 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Chmp2bQ8BJF9 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Chmp2bQ8BJF9 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Chmp2bQ8BJF9 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Chmp2bQ8BJF9 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
Chmp2bQ8BJF9 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Chmp2bQ8BJF9 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Chmp2bQ8BJF9 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Chmp2bQ8BJF9 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Chmp2bQ8BJF9 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Chmp2bQ8BJF9 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Chmp2bQ8BJF9 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Chmp2bQ8BJF9 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Chmp2bQ8BJF9 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Chmp2bQ8BJF9 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Chmp2bQ8BJF9 Gm12527-201ENSMUST00000117967 564 ntBASIC17.13■□□□□ 0.33
Chmp2bQ8BJF9 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Chmp2bQ8BJF9 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC17.13■□□□□ 0.33
Chmp2bQ8BJF9 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Chmp2bQ8BJF9 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Chmp2bQ8BJF9 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Chmp2bQ8BJF9 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Chmp2bQ8BJF9 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Chmp2bQ8BJF9 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Chmp2bQ8BJF9 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC17.13■□□□□ 0.33
Chmp2bQ8BJF9 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Chmp2bQ8BJF9 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Chmp2bQ8BJF9 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chmp2bQ8BJF9 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chmp2bQ8BJF9 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Chmp2bQ8BJF9 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Chmp2bQ8BJF9 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chmp2bQ8BJF9 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chmp2bQ8BJF9 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chmp2bQ8BJF9 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chmp2bQ8BJF9 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Chmp2bQ8BJF9 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chmp2bQ8BJF9 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC17.12■□□□□ 0.33
Chmp2bQ8BJF9 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chmp2bQ8BJF9 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC17.12■□□□□ 0.33
Chmp2bQ8BJF9 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC17.12■□□□□ 0.33
Chmp2bQ8BJF9 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chmp2bQ8BJF9 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chmp2bQ8BJF9 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Chmp2bQ8BJF9 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Chmp2bQ8BJF9 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Chmp2bQ8BJF9 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chmp2bQ8BJF9 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chmp2bQ8BJF9 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chmp2bQ8BJF9 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chmp2bQ8BJF9 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
Chmp2bQ8BJF9 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chmp2bQ8BJF9 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chmp2bQ8BJF9 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chmp2bQ8BJF9 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chmp2bQ8BJF9 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Chmp2bQ8BJF9 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Chmp2bQ8BJF9 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chmp2bQ8BJF9 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC17.11■□□□□ 0.33
Chmp2bQ8BJF9 Gm17661-201ENSMUST00000170317 270 ntBASIC17.11■□□□□ 0.33
Chmp2bQ8BJF9 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC17.11■□□□□ 0.33
Chmp2bQ8BJF9 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chmp2bQ8BJF9 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC17.11■□□□□ 0.33
Chmp2bQ8BJF9 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chmp2bQ8BJF9 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Chmp2bQ8BJF9 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chmp2bQ8BJF9 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Chmp2bQ8BJF9 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC17.11■□□□□ 0.33
Chmp2bQ8BJF9 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC17.11■□□□□ 0.33
Chmp2bQ8BJF9 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chmp2bQ8BJF9 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chmp2bQ8BJF9 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chmp2bQ8BJF9 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms