Protein–RNA interactions for Protein: Q8BH88

Depdc1b, DEP domain-containing protein 1B, mousemouse

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1bQ8BH88 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Depdc1bQ8BH88 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Depdc1bQ8BH88 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Depdc1bQ8BH88 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Depdc1bQ8BH88 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Depdc1bQ8BH88 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Depdc1bQ8BH88 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Depdc1bQ8BH88 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Depdc1bQ8BH88 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Depdc1bQ8BH88 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC18.19■□□□□ 0.5
Depdc1bQ8BH88 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC18.19■□□□□ 0.5
Depdc1bQ8BH88 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Depdc1bQ8BH88 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Depdc1bQ8BH88 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Depdc1bQ8BH88 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Depdc1bQ8BH88 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Depdc1bQ8BH88 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Depdc1bQ8BH88 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Depdc1bQ8BH88 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Depdc1bQ8BH88 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Depdc1bQ8BH88 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Depdc1bQ8BH88 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Depdc1bQ8BH88 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Depdc1bQ8BH88 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Depdc1bQ8BH88 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Depdc1bQ8BH88 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Depdc1bQ8BH88 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Depdc1bQ8BH88 Gm6659-201ENSMUST00000174752 547 ntBASIC18.18■□□□□ 0.5
Depdc1bQ8BH88 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Depdc1bQ8BH88 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Depdc1bQ8BH88 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Depdc1bQ8BH88 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Depdc1bQ8BH88 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC18.18■□□□□ 0.5
Depdc1bQ8BH88 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC18.18■□□□□ 0.5
Depdc1bQ8BH88 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Depdc1bQ8BH88 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
Depdc1bQ8BH88 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Depdc1bQ8BH88 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
Depdc1bQ8BH88 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Depdc1bQ8BH88 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Depdc1bQ8BH88 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC18.17■□□□□ 0.5
Depdc1bQ8BH88 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Depdc1bQ8BH88 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Depdc1bQ8BH88 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Depdc1bQ8BH88 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Depdc1bQ8BH88 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Depdc1bQ8BH88 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Depdc1bQ8BH88 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Depdc1bQ8BH88 Gm45058-201ENSMUST00000205810 766 ntBASIC18.17■□□□□ 0.5
Depdc1bQ8BH88 Gm9731-201ENSMUST00000209480 747 ntBASIC18.17■□□□□ 0.5
Depdc1bQ8BH88 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Depdc1bQ8BH88 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Depdc1bQ8BH88 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Depdc1bQ8BH88 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Depdc1bQ8BH88 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Depdc1bQ8BH88 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Depdc1bQ8BH88 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Depdc1bQ8BH88 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Depdc1bQ8BH88 Gm43353-201ENSMUST00000199224 1295 ntBASIC18.16■□□□□ 0.5
Depdc1bQ8BH88 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Depdc1bQ8BH88 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Depdc1bQ8BH88 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Depdc1bQ8BH88 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Depdc1bQ8BH88 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Depdc1bQ8BH88 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Depdc1bQ8BH88 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Depdc1bQ8BH88 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Depdc1bQ8BH88 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Depdc1bQ8BH88 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Depdc1bQ8BH88 Gm45774-201ENSMUST00000211992 2665 ntBASIC18.15■□□□□ 0.5
Depdc1bQ8BH88 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Depdc1bQ8BH88 Gm2274-201ENSMUST00000184539 609 ntBASIC18.15■□□□□ 0.5
Depdc1bQ8BH88 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Depdc1bQ8BH88 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Depdc1bQ8BH88 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Depdc1bQ8BH88 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Depdc1bQ8BH88 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Depdc1bQ8BH88 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Depdc1bQ8BH88 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Depdc1bQ8BH88 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Depdc1bQ8BH88 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
Depdc1bQ8BH88 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Depdc1bQ8BH88 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC18.15■□□□□ 0.5
Depdc1bQ8BH88 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Depdc1bQ8BH88 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Depdc1bQ8BH88 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Depdc1bQ8BH88 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Depdc1bQ8BH88 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Depdc1bQ8BH88 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.5
Depdc1bQ8BH88 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Depdc1bQ8BH88 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Depdc1bQ8BH88 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Depdc1bQ8BH88 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Depdc1bQ8BH88 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Depdc1bQ8BH88 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Depdc1bQ8BH88 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Depdc1bQ8BH88 Gm7638-201ENSMUST00000121348 967 ntBASIC18.14■□□□□ 0.49
Depdc1bQ8BH88 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC18.14■□□□□ 0.49
Depdc1bQ8BH88 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Depdc1bQ8BH88 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC18.14■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms