Protein–RNA interactions for Protein: Q8BGX7

Spidr, DNA repair-scaffolding protein, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SpidrQ8BGX7 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SpidrQ8BGX7 Mir5131-201ENSMUST00000175426 93 ntBASIC19.43■□□□□ 0.7
SpidrQ8BGX7 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
SpidrQ8BGX7 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SpidrQ8BGX7 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SpidrQ8BGX7 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SpidrQ8BGX7 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SpidrQ8BGX7 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
SpidrQ8BGX7 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC19.43■□□□□ 0.7
SpidrQ8BGX7 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC19.42■□□□□ 0.7
SpidrQ8BGX7 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
SpidrQ8BGX7 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SpidrQ8BGX7 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SpidrQ8BGX7 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC19.42■□□□□ 0.7
SpidrQ8BGX7 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SpidrQ8BGX7 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SpidrQ8BGX7 AC107711.5-202ENSMUST00000226429 702 ntBASIC19.42■□□□□ 0.7
SpidrQ8BGX7 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SpidrQ8BGX7 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC19.42■□□□□ 0.7
SpidrQ8BGX7 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SpidrQ8BGX7 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SpidrQ8BGX7 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SpidrQ8BGX7 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC19.41■□□□□ 0.7
SpidrQ8BGX7 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
SpidrQ8BGX7 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SpidrQ8BGX7 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SpidrQ8BGX7 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SpidrQ8BGX7 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SpidrQ8BGX7 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SpidrQ8BGX7 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SpidrQ8BGX7 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SpidrQ8BGX7 Gm10060-201ENSMUST00000212002 111 ntBASIC19.41■□□□□ 0.7
SpidrQ8BGX7 Vti1a-206ENSMUST00000225529 1244 ntBASIC19.41■□□□□ 0.7
SpidrQ8BGX7 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
SpidrQ8BGX7 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC19.41■□□□□ 0.7
SpidrQ8BGX7 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SpidrQ8BGX7 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SpidrQ8BGX7 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SpidrQ8BGX7 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SpidrQ8BGX7 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SpidrQ8BGX7 Gm9889-202ENSMUST00000206983 1577 ntBASIC19.4■□□□□ 0.7
SpidrQ8BGX7 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SpidrQ8BGX7 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SpidrQ8BGX7 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SpidrQ8BGX7 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SpidrQ8BGX7 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC19.4■□□□□ 0.7
SpidrQ8BGX7 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SpidrQ8BGX7 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SpidrQ8BGX7 Slc35b2-202ENSMUST00000223987 1766 ntBASIC19.4■□□□□ 0.7
SpidrQ8BGX7 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
SpidrQ8BGX7 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC19.4■□□□□ 0.7
SpidrQ8BGX7 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SpidrQ8BGX7 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC19.4■□□□□ 0.7
SpidrQ8BGX7 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC19.4■□□□□ 0.7
SpidrQ8BGX7 Gm1401-201ENSMUST00000122048 772 ntBASIC19.4■□□□□ 0.7
SpidrQ8BGX7 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SpidrQ8BGX7 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SpidrQ8BGX7 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SpidrQ8BGX7 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SpidrQ8BGX7 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SpidrQ8BGX7 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SpidrQ8BGX7 Gm18856-201ENSMUST00000178096 1374 ntBASIC19.4■□□□□ 0.7
SpidrQ8BGX7 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SpidrQ8BGX7 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SpidrQ8BGX7 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SpidrQ8BGX7 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SpidrQ8BGX7 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
SpidrQ8BGX7 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
SpidrQ8BGX7 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
SpidrQ8BGX7 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SpidrQ8BGX7 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SpidrQ8BGX7 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SpidrQ8BGX7 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SpidrQ8BGX7 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC19.39■□□□□ 0.69
SpidrQ8BGX7 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
SpidrQ8BGX7 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC19.39■□□□□ 0.69
SpidrQ8BGX7 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC19.39■□□□□ 0.69
SpidrQ8BGX7 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SpidrQ8BGX7 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC19.39■□□□□ 0.69
SpidrQ8BGX7 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC19.39■□□□□ 0.69
SpidrQ8BGX7 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SpidrQ8BGX7 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC19.39■□□□□ 0.69
SpidrQ8BGX7 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SpidrQ8BGX7 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
SpidrQ8BGX7 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SpidrQ8BGX7 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SpidrQ8BGX7 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SpidrQ8BGX7 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SpidrQ8BGX7 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SpidrQ8BGX7 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SpidrQ8BGX7 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SpidrQ8BGX7 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
SpidrQ8BGX7 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
SpidrQ8BGX7 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SpidrQ8BGX7 Gm12350-201ENSMUST00000121208 462 ntBASIC19.38■□□□□ 0.69
SpidrQ8BGX7 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC19.38■□□□□ 0.69
SpidrQ8BGX7 Gm25745-201ENSMUST00000174945 133 ntBASIC19.38■□□□□ 0.69
SpidrQ8BGX7 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SpidrQ8BGX7 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC19.38■□□□□ 0.69
SpidrQ8BGX7 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 11.6 ms