Protein–RNA interactions for Protein: Q80YF6

Upk3b, Uroplakin-3b, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bQ80YF6 Gm43859-201ENSMUST00000200075 1412 ntBASIC14.17□□□□□ -0.14
Upk3bQ80YF6 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Upk3bQ80YF6 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Upk3bQ80YF6 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Upk3bQ80YF6 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC14.17□□□□□ -0.14
Upk3bQ80YF6 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Upk3bQ80YF6 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Upk3bQ80YF6 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Upk3bQ80YF6 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Upk3bQ80YF6 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Upk3bQ80YF6 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC14.17□□□□□ -0.14
Upk3bQ80YF6 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Upk3bQ80YF6 Gm42545-201ENSMUST00000202755 922 ntBASIC14.17□□□□□ -0.14
Upk3bQ80YF6 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Upk3bQ80YF6 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Upk3bQ80YF6 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Upk3bQ80YF6 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Upk3bQ80YF6 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Upk3bQ80YF6 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Upk3bQ80YF6 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Upk3bQ80YF6 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Upk3bQ80YF6 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Upk3bQ80YF6 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Upk3bQ80YF6 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Upk3bQ80YF6 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Upk3bQ80YF6 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Upk3bQ80YF6 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Upk3bQ80YF6 CT010444.2-201ENSMUST00000217877 1629 ntBASIC14.16□□□□□ -0.14
Upk3bQ80YF6 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Upk3bQ80YF6 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Upk3bQ80YF6 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC14.16□□□□□ -0.14
Upk3bQ80YF6 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Upk3bQ80YF6 AL590614.2-201ENSMUST00000225374 1937 ntBASIC14.16□□□□□ -0.14
Upk3bQ80YF6 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Upk3bQ80YF6 Gm24841-201ENSMUST00000158676 357 ntBASIC14.16□□□□□ -0.14
Upk3bQ80YF6 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Upk3bQ80YF6 Gm8495-201ENSMUST00000188740 694 ntBASIC14.16□□□□□ -0.14
Upk3bQ80YF6 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Upk3bQ80YF6 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Upk3bQ80YF6 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Upk3bQ80YF6 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC14.16□□□□□ -0.14
Upk3bQ80YF6 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Upk3bQ80YF6 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Upk3bQ80YF6 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Upk3bQ80YF6 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Upk3bQ80YF6 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Upk3bQ80YF6 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Upk3bQ80YF6 AC069562.2-201ENSMUST00000224644 2146 ntBASIC14.15□□□□□ -0.14
Upk3bQ80YF6 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Upk3bQ80YF6 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Upk3bQ80YF6 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Upk3bQ80YF6 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Upk3bQ80YF6 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Upk3bQ80YF6 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Upk3bQ80YF6 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Upk3bQ80YF6 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Upk3bQ80YF6 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Upk3bQ80YF6 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Upk3bQ80YF6 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Upk3bQ80YF6 Gm10517-202ENSMUST00000192970 758 ntBASIC14.15□□□□□ -0.14
Upk3bQ80YF6 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC14.15□□□□□ -0.14
Upk3bQ80YF6 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Upk3bQ80YF6 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Upk3bQ80YF6 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Upk3bQ80YF6 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Upk3bQ80YF6 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Upk3bQ80YF6 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Upk3bQ80YF6 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Upk3bQ80YF6 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Upk3bQ80YF6 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Upk3bQ80YF6 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Upk3bQ80YF6 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Upk3bQ80YF6 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Upk3bQ80YF6 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC14.15□□□□□ -0.15
Upk3bQ80YF6 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
Upk3bQ80YF6 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Upk3bQ80YF6 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Upk3bQ80YF6 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Upk3bQ80YF6 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
Upk3bQ80YF6 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Upk3bQ80YF6 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Upk3bQ80YF6 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Upk3bQ80YF6 Gm17661-201ENSMUST00000170317 270 ntBASIC14.14□□□□□ -0.15
Upk3bQ80YF6 Gm37025-201ENSMUST00000195159 829 ntBASIC14.14□□□□□ -0.15
Upk3bQ80YF6 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC14.14□□□□□ -0.15
Upk3bQ80YF6 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Upk3bQ80YF6 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Upk3bQ80YF6 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Upk3bQ80YF6 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Upk3bQ80YF6 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
Upk3bQ80YF6 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Upk3bQ80YF6 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Upk3bQ80YF6 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Upk3bQ80YF6 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Upk3bQ80YF6 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Upk3bQ80YF6 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
Upk3bQ80YF6 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Upk3bQ80YF6 Dancr-204ENSMUST00000132389 2347 ntBASIC14.14□□□□□ -0.15
Upk3bQ80YF6 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Upk3bQ80YF6 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 81.9 ms