Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pif1Q80SX8 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC15.4■□□□□ 0.06
Pif1Q80SX8 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pif1Q80SX8 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pif1Q80SX8 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.06
Pif1Q80SX8 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pif1Q80SX8 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pif1Q80SX8 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pif1Q80SX8 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pif1Q80SX8 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pif1Q80SX8 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pif1Q80SX8 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pif1Q80SX8 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Pif1Q80SX8 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pif1Q80SX8 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pif1Q80SX8 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pif1Q80SX8 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC15.39■□□□□ 0.05
Pif1Q80SX8 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC15.39■□□□□ 0.05
Pif1Q80SX8 AC124569.2-201ENSMUST00000225998 818 ntBASIC15.39■□□□□ 0.05
Pif1Q80SX8 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Pif1Q80SX8 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Pif1Q80SX8 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Pif1Q80SX8 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pif1Q80SX8 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Pif1Q80SX8 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Pif1Q80SX8 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pif1Q80SX8 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Pif1Q80SX8 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Pif1Q80SX8 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pif1Q80SX8 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pif1Q80SX8 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Pif1Q80SX8 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pif1Q80SX8 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Pif1Q80SX8 Gm45244-201ENSMUST00000211328 2200 ntBASIC15.39■□□□□ 0.05
Pif1Q80SX8 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pif1Q80SX8 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pif1Q80SX8 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Pif1Q80SX8 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Pif1Q80SX8 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pif1Q80SX8 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pif1Q80SX8 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Pif1Q80SX8 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC15.38■□□□□ 0.05
Pif1Q80SX8 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Pif1Q80SX8 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC15.38■□□□□ 0.05
Pif1Q80SX8 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC15.38■□□□□ 0.05
Pif1Q80SX8 AC164629.2-201ENSMUST00000217916 270 ntBASIC15.38■□□□□ 0.05
Pif1Q80SX8 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pif1Q80SX8 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
Pif1Q80SX8 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Pif1Q80SX8 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pif1Q80SX8 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pif1Q80SX8 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Pif1Q80SX8 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Pif1Q80SX8 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Pif1Q80SX8 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pif1Q80SX8 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pif1Q80SX8 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC15.37■□□□□ 0.05
Pif1Q80SX8 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Pif1Q80SX8 Gm45412-201ENSMUST00000210217 2275 ntBASIC15.37■□□□□ 0.05
Pif1Q80SX8 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Pif1Q80SX8 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC15.37■□□□□ 0.05
Pif1Q80SX8 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pif1Q80SX8 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Pif1Q80SX8 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Pif1Q80SX8 Gm5864-201ENSMUST00000202263 970 ntBASIC15.37■□□□□ 0.05
Pif1Q80SX8 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pif1Q80SX8 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pif1Q80SX8 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC15.37■□□□□ 0.05
Pif1Q80SX8 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pif1Q80SX8 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Pif1Q80SX8 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pif1Q80SX8 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Pif1Q80SX8 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pif1Q80SX8 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Pif1Q80SX8 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pif1Q80SX8 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pif1Q80SX8 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC15.36■□□□□ 0.05
Pif1Q80SX8 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pif1Q80SX8 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC15.36■□□□□ 0.05
Pif1Q80SX8 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pif1Q80SX8 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pif1Q80SX8 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pif1Q80SX8 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pif1Q80SX8 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Pif1Q80SX8 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pif1Q80SX8 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC15.36■□□□□ 0.05
Pif1Q80SX8 Gm13186-201ENSMUST00000118031 316 ntBASIC15.36■□□□□ 0.05
Pif1Q80SX8 Gm12895-201ENSMUST00000122214 226 ntBASIC15.36■□□□□ 0.05
Pif1Q80SX8 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC15.36■□□□□ 0.05
Pif1Q80SX8 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Pif1Q80SX8 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
Pif1Q80SX8 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Pif1Q80SX8 Gm27459-201ENSMUST00000184860 107 ntBASIC15.36■□□□□ 0.05
Pif1Q80SX8 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pif1Q80SX8 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pif1Q80SX8 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pif1Q80SX8 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pif1Q80SX8 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pif1Q80SX8 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Pif1Q80SX8 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms