Protein–RNA interactions for Protein: Q7TNH6

Nphp3, Nephrocystin-3, mousemouse

Predictions only

Length 1,325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp3Q7TNH6 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Nphp3Q7TNH6 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC20.32■□□□□ 0.84
Nphp3Q7TNH6 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Nphp3Q7TNH6 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nphp3Q7TNH6 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Nphp3Q7TNH6 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nphp3Q7TNH6 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nphp3Q7TNH6 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nphp3Q7TNH6 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Nphp3Q7TNH6 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nphp3Q7TNH6 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nphp3Q7TNH6 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nphp3Q7TNH6 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nphp3Q7TNH6 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nphp3Q7TNH6 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nphp3Q7TNH6 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nphp3Q7TNH6 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
Nphp3Q7TNH6 Gm7292-201ENSMUST00000194706 2527 ntBASIC20.32■□□□□ 0.84
Nphp3Q7TNH6 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC20.31■□□□□ 0.84
Nphp3Q7TNH6 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC20.31■□□□□ 0.84
Nphp3Q7TNH6 Gm27704-201ENSMUST00000185094 107 ntBASIC20.31■□□□□ 0.84
Nphp3Q7TNH6 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nphp3Q7TNH6 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nphp3Q7TNH6 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Nphp3Q7TNH6 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Nphp3Q7TNH6 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Nphp3Q7TNH6 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC20.31■□□□□ 0.84
Nphp3Q7TNH6 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Nphp3Q7TNH6 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Nphp3Q7TNH6 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC20.31■□□□□ 0.84
Nphp3Q7TNH6 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nphp3Q7TNH6 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nphp3Q7TNH6 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC20.31■□□□□ 0.84
Nphp3Q7TNH6 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Nphp3Q7TNH6 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Nphp3Q7TNH6 Gm6623-201ENSMUST00000173570 544 ntBASIC20.3■□□□□ 0.84
Nphp3Q7TNH6 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nphp3Q7TNH6 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nphp3Q7TNH6 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Nphp3Q7TNH6 AC130713.1-201ENSMUST00000228853 1096 ntBASIC20.3■□□□□ 0.84
Nphp3Q7TNH6 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nphp3Q7TNH6 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nphp3Q7TNH6 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
Nphp3Q7TNH6 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nphp3Q7TNH6 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nphp3Q7TNH6 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nphp3Q7TNH6 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Nphp3Q7TNH6 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Nphp3Q7TNH6 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nphp3Q7TNH6 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC20.29■□□□□ 0.84
Nphp3Q7TNH6 Ank2-226ENSMUST00000189368 339 ntBASIC20.29■□□□□ 0.84
Nphp3Q7TNH6 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC20.29■□□□□ 0.84
Nphp3Q7TNH6 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nphp3Q7TNH6 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Nphp3Q7TNH6 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nphp3Q7TNH6 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nphp3Q7TNH6 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nphp3Q7TNH6 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Nphp3Q7TNH6 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC20.29■□□□□ 0.84
Nphp3Q7TNH6 Zkscan4-202ENSMUST00000225845 1506 ntBASIC20.29■□□□□ 0.84
Nphp3Q7TNH6 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Nphp3Q7TNH6 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nphp3Q7TNH6 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nphp3Q7TNH6 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nphp3Q7TNH6 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nphp3Q7TNH6 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Nphp3Q7TNH6 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC20.28■□□□□ 0.84
Nphp3Q7TNH6 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nphp3Q7TNH6 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Nphp3Q7TNH6 Gm18421-201ENSMUST00000204122 625 ntBASIC20.28■□□□□ 0.84
Nphp3Q7TNH6 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nphp3Q7TNH6 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Nphp3Q7TNH6 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nphp3Q7TNH6 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nphp3Q7TNH6 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nphp3Q7TNH6 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nphp3Q7TNH6 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nphp3Q7TNH6 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nphp3Q7TNH6 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Nphp3Q7TNH6 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nphp3Q7TNH6 Gm45203-201ENSMUST00000206384 1831 ntBASIC20.28■□□□□ 0.84
Nphp3Q7TNH6 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nphp3Q7TNH6 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nphp3Q7TNH6 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Nphp3Q7TNH6 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Nphp3Q7TNH6 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
Nphp3Q7TNH6 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC20.27■□□□□ 0.84
Nphp3Q7TNH6 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nphp3Q7TNH6 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Nphp3Q7TNH6 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nphp3Q7TNH6 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nphp3Q7TNH6 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Nphp3Q7TNH6 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC20.27■□□□□ 0.84
Nphp3Q7TNH6 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nphp3Q7TNH6 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nphp3Q7TNH6 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Nphp3Q7TNH6 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC20.27■□□□□ 0.84
Nphp3Q7TNH6 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Nphp3Q7TNH6 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
Nphp3Q7TNH6 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC20.27■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms