Protein–RNA interactions for Protein: Q71M36

Cspg5, Chondroitin sulfate proteoglycan 5, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg5Q71M36 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cspg5Q71M36 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
Cspg5Q71M36 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cspg5Q71M36 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cspg5Q71M36 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cspg5Q71M36 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cspg5Q71M36 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cspg5Q71M36 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Cspg5Q71M36 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cspg5Q71M36 Gm11860-201ENSMUST00000122346 1010 ntBASIC17.3■□□□□ 0.36
Cspg5Q71M36 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cspg5Q71M36 Gm27742-201ENSMUST00000184667 60 ntBASIC17.3■□□□□ 0.36
Cspg5Q71M36 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cspg5Q71M36 Gm37722-201ENSMUST00000193757 208 ntBASIC17.3■□□□□ 0.36
Cspg5Q71M36 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cspg5Q71M36 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cspg5Q71M36 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cspg5Q71M36 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cspg5Q71M36 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cspg5Q71M36 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC17.3■□□□□ 0.36
Cspg5Q71M36 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cspg5Q71M36 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cspg5Q71M36 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cspg5Q71M36 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cspg5Q71M36 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Cspg5Q71M36 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cspg5Q71M36 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cspg5Q71M36 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cspg5Q71M36 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Cspg5Q71M36 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cspg5Q71M36 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cspg5Q71M36 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cspg5Q71M36 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cspg5Q71M36 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cspg5Q71M36 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cspg5Q71M36 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cspg5Q71M36 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC17.29■□□□□ 0.36
Cspg5Q71M36 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC17.29■□□□□ 0.36
Cspg5Q71M36 Il3ra-202ENSMUST00000223589 738 ntBASIC17.29■□□□□ 0.36
Cspg5Q71M36 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cspg5Q71M36 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cspg5Q71M36 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cspg5Q71M36 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cspg5Q71M36 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cspg5Q71M36 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Cspg5Q71M36 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
Cspg5Q71M36 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cspg5Q71M36 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cspg5Q71M36 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cspg5Q71M36 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cspg5Q71M36 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cspg5Q71M36 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cspg5Q71M36 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cspg5Q71M36 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cspg5Q71M36 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cspg5Q71M36 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Cspg5Q71M36 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC17.28■□□□□ 0.36
Cspg5Q71M36 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Cspg5Q71M36 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC17.28■□□□□ 0.36
Cspg5Q71M36 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cspg5Q71M36 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cspg5Q71M36 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cspg5Q71M36 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
Cspg5Q71M36 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cspg5Q71M36 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Cspg5Q71M36 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cspg5Q71M36 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Cspg5Q71M36 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cspg5Q71M36 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Cspg5Q71M36 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cspg5Q71M36 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cspg5Q71M36 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cspg5Q71M36 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Cspg5Q71M36 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cspg5Q71M36 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cspg5Q71M36 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cspg5Q71M36 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cspg5Q71M36 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Cspg5Q71M36 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cspg5Q71M36 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Cspg5Q71M36 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cspg5Q71M36 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cspg5Q71M36 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Cspg5Q71M36 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cspg5Q71M36 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Cspg5Q71M36 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cspg5Q71M36 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Cspg5Q71M36 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cspg5Q71M36 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cspg5Q71M36 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
Cspg5Q71M36 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cspg5Q71M36 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cspg5Q71M36 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cspg5Q71M36 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Cspg5Q71M36 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cspg5Q71M36 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cspg5Q71M36 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Cspg5Q71M36 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Cspg5Q71M36 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Cspg5Q71M36 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms