Protein–RNA interactions for Protein: Q6T3U4

Npc1l1, Niemann-Pick C1-like protein 1, mousemouse

Predictions only

Length 1,333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1l1Q6T3U4 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Npc1l1Q6T3U4 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Npc1l1Q6T3U4 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Npc1l1Q6T3U4 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Npc1l1Q6T3U4 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Npc1l1Q6T3U4 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Npc1l1Q6T3U4 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
Npc1l1Q6T3U4 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Npc1l1Q6T3U4 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Npc1l1Q6T3U4 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC20.01■□□□□ 0.79
Npc1l1Q6T3U4 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Npc1l1Q6T3U4 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Npc1l1Q6T3U4 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Npc1l1Q6T3U4 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC20.01■□□□□ 0.79
Npc1l1Q6T3U4 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Npc1l1Q6T3U4 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC20.01■□□□□ 0.79
Npc1l1Q6T3U4 Mzt1-203ENSMUST00000227948 952 ntBASIC20.01■□□□□ 0.79
Npc1l1Q6T3U4 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Npc1l1Q6T3U4 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Npc1l1Q6T3U4 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Npc1l1Q6T3U4 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Npc1l1Q6T3U4 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Npc1l1Q6T3U4 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Npc1l1Q6T3U4 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC20■□□□□ 0.79
Npc1l1Q6T3U4 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Npc1l1Q6T3U4 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Npc1l1Q6T3U4 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Npc1l1Q6T3U4 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC20■□□□□ 0.79
Npc1l1Q6T3U4 Zfp264-201ENSMUST00000208656 1563 ntBASIC20■□□□□ 0.79
Npc1l1Q6T3U4 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Npc1l1Q6T3U4 Gm15794-201ENSMUST00000120182 631 ntBASIC20■□□□□ 0.79
Npc1l1Q6T3U4 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC20■□□□□ 0.79
Npc1l1Q6T3U4 Gm29707-201ENSMUST00000196325 491 ntBASIC20■□□□□ 0.79
Npc1l1Q6T3U4 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC20■□□□□ 0.79
Npc1l1Q6T3U4 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Npc1l1Q6T3U4 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Npc1l1Q6T3U4 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Npc1l1Q6T3U4 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Npc1l1Q6T3U4 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC19.99■□□□□ 0.79
Npc1l1Q6T3U4 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Npc1l1Q6T3U4 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Npc1l1Q6T3U4 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Npc1l1Q6T3U4 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Npc1l1Q6T3U4 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Npc1l1Q6T3U4 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Npc1l1Q6T3U4 Gm18421-201ENSMUST00000204122 625 ntBASIC19.99■□□□□ 0.79
Npc1l1Q6T3U4 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Npc1l1Q6T3U4 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Npc1l1Q6T3U4 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Npc1l1Q6T3U4 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC19.98■□□□□ 0.79
Npc1l1Q6T3U4 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Npc1l1Q6T3U4 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Npc1l1Q6T3U4 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Npc1l1Q6T3U4 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Npc1l1Q6T3U4 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Npc1l1Q6T3U4 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC19.98■□□□□ 0.79
Npc1l1Q6T3U4 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC19.98■□□□□ 0.79
Npc1l1Q6T3U4 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Npc1l1Q6T3U4 AC125350.1-201ENSMUST00000225115 903 ntBASIC19.98■□□□□ 0.79
Npc1l1Q6T3U4 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC19.98■□□□□ 0.79
Npc1l1Q6T3U4 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Npc1l1Q6T3U4 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Npc1l1Q6T3U4 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Npc1l1Q6T3U4 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
Npc1l1Q6T3U4 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Npc1l1Q6T3U4 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Npc1l1Q6T3U4 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Npc1l1Q6T3U4 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Npc1l1Q6T3U4 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Npc1l1Q6T3U4 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC19.97■□□□□ 0.79
Npc1l1Q6T3U4 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Npc1l1Q6T3U4 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Npc1l1Q6T3U4 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Npc1l1Q6T3U4 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Npc1l1Q6T3U4 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Npc1l1Q6T3U4 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC19.97■□□□□ 0.79
Npc1l1Q6T3U4 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC19.97■□□□□ 0.79
Npc1l1Q6T3U4 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC19.97■□□□□ 0.79
Npc1l1Q6T3U4 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC19.97■□□□□ 0.79
Npc1l1Q6T3U4 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Npc1l1Q6T3U4 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Npc1l1Q6T3U4 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Npc1l1Q6T3U4 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Npc1l1Q6T3U4 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Npc1l1Q6T3U4 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Npc1l1Q6T3U4 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
Npc1l1Q6T3U4 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Npc1l1Q6T3U4 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Npc1l1Q6T3U4 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Npc1l1Q6T3U4 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Npc1l1Q6T3U4 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Npc1l1Q6T3U4 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Npc1l1Q6T3U4 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Npc1l1Q6T3U4 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC19.96■□□□□ 0.79
Npc1l1Q6T3U4 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Npc1l1Q6T3U4 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Npc1l1Q6T3U4 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Npc1l1Q6T3U4 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Npc1l1Q6T3U4 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Npc1l1Q6T3U4 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms