Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rif1Q6PR54 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC14.06□□□□□ -0.16
Rif1Q6PR54 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC14.06□□□□□ -0.16
Rif1Q6PR54 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rif1Q6PR54 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rif1Q6PR54 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Rif1Q6PR54 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rif1Q6PR54 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Rif1Q6PR54 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Rif1Q6PR54 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Rif1Q6PR54 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC14.05□□□□□ -0.16
Rif1Q6PR54 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Rif1Q6PR54 Gm22175-201ENSMUST00000175007 78 ntBASIC14.05□□□□□ -0.16
Rif1Q6PR54 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC14.05□□□□□ -0.16
Rif1Q6PR54 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Rif1Q6PR54 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rif1Q6PR54 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rif1Q6PR54 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rif1Q6PR54 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Rif1Q6PR54 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Rif1Q6PR54 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rif1Q6PR54 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rif1Q6PR54 Hsf1-207ENSMUST00000228371 2102 ntBASIC14.05□□□□□ -0.16
Rif1Q6PR54 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Rif1Q6PR54 Gm11873-201ENSMUST00000117877 1304 ntBASIC14.05□□□□□ -0.16
Rif1Q6PR54 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC14.05□□□□□ -0.16
Rif1Q6PR54 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Rif1Q6PR54 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Rif1Q6PR54 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Rif1Q6PR54 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rif1Q6PR54 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Rif1Q6PR54 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC14.05□□□□□ -0.16
Rif1Q6PR54 Gm27306-201ENSMUST00000183970 107 ntBASIC14.05□□□□□ -0.16
Rif1Q6PR54 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC14.05□□□□□ -0.16
Rif1Q6PR54 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Rif1Q6PR54 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rif1Q6PR54 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rif1Q6PR54 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Rif1Q6PR54 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rif1Q6PR54 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rif1Q6PR54 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Rif1Q6PR54 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC14.04□□□□□ -0.16
Rif1Q6PR54 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC14.04□□□□□ -0.16
Rif1Q6PR54 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC14.04□□□□□ -0.16
Rif1Q6PR54 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rif1Q6PR54 AC153962.4-201ENSMUST00000217878 242 ntBASIC14.04□□□□□ -0.16
Rif1Q6PR54 AC154572.2-201ENSMUST00000225105 997 ntBASIC14.04□□□□□ -0.16
Rif1Q6PR54 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rif1Q6PR54 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Rif1Q6PR54 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rif1Q6PR54 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rif1Q6PR54 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rif1Q6PR54 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rif1Q6PR54 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rif1Q6PR54 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rif1Q6PR54 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rif1Q6PR54 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Rif1Q6PR54 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rif1Q6PR54 Gm37805-201ENSMUST00000192612 1094 ntBASIC14.04□□□□□ -0.16
Rif1Q6PR54 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC14.04□□□□□ -0.16
Rif1Q6PR54 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC14.04□□□□□ -0.16
Rif1Q6PR54 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rif1Q6PR54 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Rif1Q6PR54 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rif1Q6PR54 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rif1Q6PR54 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rif1Q6PR54 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rif1Q6PR54 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rif1Q6PR54 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC14.03□□□□□ -0.16
Rif1Q6PR54 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC14.03□□□□□ -0.16
Rif1Q6PR54 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC14.03□□□□□ -0.16
Rif1Q6PR54 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC14.03□□□□□ -0.16
Rif1Q6PR54 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC14.03□□□□□ -0.16
Rif1Q6PR54 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rif1Q6PR54 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Rif1Q6PR54 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Rif1Q6PR54 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC14.03□□□□□ -0.16
Rif1Q6PR54 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC14.03□□□□□ -0.16
Rif1Q6PR54 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
Rif1Q6PR54 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC14.03□□□□□ -0.16
Rif1Q6PR54 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Rif1Q6PR54 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rif1Q6PR54 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rif1Q6PR54 Gm7222-201ENSMUST00000117512 906 ntBASIC14.03□□□□□ -0.16
Rif1Q6PR54 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rif1Q6PR54 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rif1Q6PR54 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rif1Q6PR54 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rif1Q6PR54 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rif1Q6PR54 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rif1Q6PR54 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC14.02□□□□□ -0.16
Rif1Q6PR54 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rif1Q6PR54 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rif1Q6PR54 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rif1Q6PR54 Gm17271-201ENSMUST00000165535 355 ntBASIC14.02□□□□□ -0.16
Rif1Q6PR54 Mir3547-201ENSMUST00000175461 88 ntBASIC14.02□□□□□ -0.16
Rif1Q6PR54 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC14.02□□□□□ -0.16
Rif1Q6PR54 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Rif1Q6PR54 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rif1Q6PR54 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms