Protein–RNA interactions for Protein: Q6NZM9

Hdac4, Histone deacetylase 4, mousemouse

Predictions only

Length 1,076 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac4Q6NZM9 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hdac4Q6NZM9 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hdac4Q6NZM9 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Hdac4Q6NZM9 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hdac4Q6NZM9 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hdac4Q6NZM9 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Hdac4Q6NZM9 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hdac4Q6NZM9 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Hdac4Q6NZM9 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Hdac4Q6NZM9 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hdac4Q6NZM9 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hdac4Q6NZM9 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
Hdac4Q6NZM9 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Hdac4Q6NZM9 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hdac4Q6NZM9 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hdac4Q6NZM9 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hdac4Q6NZM9 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC18.7■□□□□ 0.58
Hdac4Q6NZM9 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC18.7■□□□□ 0.58
Hdac4Q6NZM9 AC159205.6-201ENSMUST00000224935 887 ntBASIC18.7■□□□□ 0.58
Hdac4Q6NZM9 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hdac4Q6NZM9 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hdac4Q6NZM9 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hdac4Q6NZM9 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
Hdac4Q6NZM9 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hdac4Q6NZM9 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Hdac4Q6NZM9 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Hdac4Q6NZM9 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hdac4Q6NZM9 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hdac4Q6NZM9 Gm28265-201ENSMUST00000188201 2319 ntBASIC18.69■□□□□ 0.58
Hdac4Q6NZM9 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC18.69■□□□□ 0.58
Hdac4Q6NZM9 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hdac4Q6NZM9 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Hdac4Q6NZM9 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Hdac4Q6NZM9 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hdac4Q6NZM9 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Hdac4Q6NZM9 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hdac4Q6NZM9 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hdac4Q6NZM9 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hdac4Q6NZM9 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Hdac4Q6NZM9 Gm15565-201ENSMUST00000118890 427 ntBASIC18.69■□□□□ 0.58
Hdac4Q6NZM9 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC18.69■□□□□ 0.58
Hdac4Q6NZM9 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC18.69■□□□□ 0.58
Hdac4Q6NZM9 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Hdac4Q6NZM9 Gm3272-201ENSMUST00000181181 1229 ntBASIC18.69■□□□□ 0.58
Hdac4Q6NZM9 Gm7213-201ENSMUST00000215977 950 ntBASIC18.69■□□□□ 0.58
Hdac4Q6NZM9 Gm18115-201ENSMUST00000221209 621 ntBASIC18.69■□□□□ 0.58
Hdac4Q6NZM9 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hdac4Q6NZM9 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Hdac4Q6NZM9 Gm10566-201ENSMUST00000086739 996 ntBASIC18.69■□□□□ 0.58
Hdac4Q6NZM9 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hdac4Q6NZM9 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Hdac4Q6NZM9 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Hdac4Q6NZM9 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hdac4Q6NZM9 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hdac4Q6NZM9 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hdac4Q6NZM9 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hdac4Q6NZM9 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hdac4Q6NZM9 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Hdac4Q6NZM9 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
Hdac4Q6NZM9 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Hdac4Q6NZM9 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Hdac4Q6NZM9 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC18.68■□□□□ 0.58
Hdac4Q6NZM9 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Hdac4Q6NZM9 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Hdac4Q6NZM9 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Hdac4Q6NZM9 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hdac4Q6NZM9 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hdac4Q6NZM9 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Hdac4Q6NZM9 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Hdac4Q6NZM9 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hdac4Q6NZM9 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Hdac4Q6NZM9 Gm37166-201ENSMUST00000195473 2474 ntBASIC18.68■□□□□ 0.58
Hdac4Q6NZM9 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Hdac4Q6NZM9 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hdac4Q6NZM9 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hdac4Q6NZM9 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Hdac4Q6NZM9 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Hdac4Q6NZM9 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC18.68■□□□□ 0.58
Hdac4Q6NZM9 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hdac4Q6NZM9 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hdac4Q6NZM9 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hdac4Q6NZM9 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hdac4Q6NZM9 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hdac4Q6NZM9 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Hdac4Q6NZM9 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hdac4Q6NZM9 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC18.67■□□□□ 0.58
Hdac4Q6NZM9 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hdac4Q6NZM9 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hdac4Q6NZM9 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Hdac4Q6NZM9 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Hdac4Q6NZM9 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Hdac4Q6NZM9 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hdac4Q6NZM9 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC18.67■□□□□ 0.58
Hdac4Q6NZM9 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hdac4Q6NZM9 Shroom3-211ENSMUST00000225438 5742 ntBASIC18.67■□□□□ 0.58
Hdac4Q6NZM9 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hdac4Q6NZM9 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hdac4Q6NZM9 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
Hdac4Q6NZM9 Gm8668-201ENSMUST00000120559 1447 ntBASIC18.66■□□□□ 0.58
Hdac4Q6NZM9 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms