Protein–RNA interactions for Protein: Q6DID3

Scaf8, Protein SCAF8, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf8Q6DID3 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Scaf8Q6DID3 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Scaf8Q6DID3 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Scaf8Q6DID3 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Scaf8Q6DID3 AC122901.1-201ENSMUST00000214203 1790 ntBASIC19.5■□□□□ 0.71
Scaf8Q6DID3 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Scaf8Q6DID3 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Scaf8Q6DID3 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Scaf8Q6DID3 Gm9727-201ENSMUST00000161387 555 ntBASIC19.5■□□□□ 0.71
Scaf8Q6DID3 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Scaf8Q6DID3 Gm44430-201ENSMUST00000203376 995 ntBASIC19.5■□□□□ 0.71
Scaf8Q6DID3 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Scaf8Q6DID3 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Scaf8Q6DID3 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Scaf8Q6DID3 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Scaf8Q6DID3 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Scaf8Q6DID3 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Scaf8Q6DID3 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Scaf8Q6DID3 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Scaf8Q6DID3 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Scaf8Q6DID3 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Scaf8Q6DID3 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC19.49■□□□□ 0.71
Scaf8Q6DID3 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC19.49■□□□□ 0.71
Scaf8Q6DID3 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Scaf8Q6DID3 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC19.49■□□□□ 0.71
Scaf8Q6DID3 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC19.49■□□□□ 0.71
Scaf8Q6DID3 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC19.49■□□□□ 0.71
Scaf8Q6DID3 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC19.49■□□□□ 0.71
Scaf8Q6DID3 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Scaf8Q6DID3 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Scaf8Q6DID3 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Scaf8Q6DID3 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC19.49■□□□□ 0.71
Scaf8Q6DID3 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC19.49■□□□□ 0.71
Scaf8Q6DID3 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Scaf8Q6DID3 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Scaf8Q6DID3 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Scaf8Q6DID3 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Scaf8Q6DID3 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Scaf8Q6DID3 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC19.49■□□□□ 0.71
Scaf8Q6DID3 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
Scaf8Q6DID3 Gm5648-201ENSMUST00000122244 1587 ntBASIC19.49■□□□□ 0.71
Scaf8Q6DID3 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Scaf8Q6DID3 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Scaf8Q6DID3 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC19.48■□□□□ 0.71
Scaf8Q6DID3 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Scaf8Q6DID3 Gm43936-201ENSMUST00000203987 490 ntTSL 5 BASIC19.48■□□□□ 0.71
Scaf8Q6DID3 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Scaf8Q6DID3 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Scaf8Q6DID3 Gfra2-202ENSMUST00000227633 1480 ntBASIC19.48■□□□□ 0.71
Scaf8Q6DID3 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Scaf8Q6DID3 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Scaf8Q6DID3 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Scaf8Q6DID3 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Scaf8Q6DID3 Gm26308-201ENSMUST00000157768 69 ntBASIC19.47■□□□□ 0.71
Scaf8Q6DID3 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Scaf8Q6DID3 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
Scaf8Q6DID3 Gm6550-201ENSMUST00000187574 993 ntBASIC19.47■□□□□ 0.71
Scaf8Q6DID3 AC151286.1-201ENSMUST00000198489 145 ntBASIC19.47■□□□□ 0.71
Scaf8Q6DID3 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Scaf8Q6DID3 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Scaf8Q6DID3 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Scaf8Q6DID3 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Scaf8Q6DID3 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Scaf8Q6DID3 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Scaf8Q6DID3 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Scaf8Q6DID3 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Scaf8Q6DID3 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
Scaf8Q6DID3 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Scaf8Q6DID3 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Scaf8Q6DID3 Gm37584-201ENSMUST00000193595 1290 ntBASIC19.46■□□□□ 0.71
Scaf8Q6DID3 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Scaf8Q6DID3 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
Scaf8Q6DID3 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Scaf8Q6DID3 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Scaf8Q6DID3 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Scaf8Q6DID3 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Scaf8Q6DID3 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Scaf8Q6DID3 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Scaf8Q6DID3 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Scaf8Q6DID3 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Scaf8Q6DID3 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Scaf8Q6DID3 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Scaf8Q6DID3 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Scaf8Q6DID3 Gm13036-201ENSMUST00000117799 748 ntBASIC19.45■□□□□ 0.7
Scaf8Q6DID3 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC19.45■□□□□ 0.7
Scaf8Q6DID3 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Scaf8Q6DID3 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC19.45■□□□□ 0.7
Scaf8Q6DID3 AV026068-213ENSMUST00000223675 1171 ntBASIC19.45■□□□□ 0.7
Scaf8Q6DID3 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Scaf8Q6DID3 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Scaf8Q6DID3 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Scaf8Q6DID3 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Scaf8Q6DID3 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Scaf8Q6DID3 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Scaf8Q6DID3 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Scaf8Q6DID3 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC19.44■□□□□ 0.7
Scaf8Q6DID3 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Scaf8Q6DID3 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Scaf8Q6DID3 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC19.44■□□□□ 0.7
Scaf8Q6DID3 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms