Protein–RNA interactions for Protein: Q69ZS0

Pdzrn3, E3 ubiquitin-protein ligase PDZRN3, mousemouse

Predictions only

Length 1,063 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdzrn3Q69ZS0 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC20.46■□□□□ 0.87
Pdzrn3Q69ZS0 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Pdzrn3Q69ZS0 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pdzrn3Q69ZS0 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC20.46■□□□□ 0.87
Pdzrn3Q69ZS0 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Pdzrn3Q69ZS0 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Pdzrn3Q69ZS0 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pdzrn3Q69ZS0 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Pdzrn3Q69ZS0 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC20.46■□□□□ 0.87
Pdzrn3Q69ZS0 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC20.46■□□□□ 0.87
Pdzrn3Q69ZS0 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Pdzrn3Q69ZS0 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Pdzrn3Q69ZS0 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pdzrn3Q69ZS0 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC20.46■□□□□ 0.87
Pdzrn3Q69ZS0 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pdzrn3Q69ZS0 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Pdzrn3Q69ZS0 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pdzrn3Q69ZS0 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Pdzrn3Q69ZS0 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pdzrn3Q69ZS0 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pdzrn3Q69ZS0 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pdzrn3Q69ZS0 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pdzrn3Q69ZS0 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Pdzrn3Q69ZS0 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Pdzrn3Q69ZS0 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Pdzrn3Q69ZS0 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC20.45■□□□□ 0.86
Pdzrn3Q69ZS0 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pdzrn3Q69ZS0 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pdzrn3Q69ZS0 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pdzrn3Q69ZS0 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
Pdzrn3Q69ZS0 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pdzrn3Q69ZS0 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Pdzrn3Q69ZS0 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pdzrn3Q69ZS0 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pdzrn3Q69ZS0 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Pdzrn3Q69ZS0 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Pdzrn3Q69ZS0 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pdzrn3Q69ZS0 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pdzrn3Q69ZS0 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pdzrn3Q69ZS0 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pdzrn3Q69ZS0 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Pdzrn3Q69ZS0 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pdzrn3Q69ZS0 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pdzrn3Q69ZS0 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pdzrn3Q69ZS0 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Pdzrn3Q69ZS0 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pdzrn3Q69ZS0 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Pdzrn3Q69ZS0 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Pdzrn3Q69ZS0 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pdzrn3Q69ZS0 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pdzrn3Q69ZS0 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC20.43■□□□□ 0.86
Pdzrn3Q69ZS0 Gm43514-201ENSMUST00000198852 424 ntBASIC20.43■□□□□ 0.86
Pdzrn3Q69ZS0 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pdzrn3Q69ZS0 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Pdzrn3Q69ZS0 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Pdzrn3Q69ZS0 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Pdzrn3Q69ZS0 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Pdzrn3Q69ZS0 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pdzrn3Q69ZS0 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Pdzrn3Q69ZS0 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pdzrn3Q69ZS0 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pdzrn3Q69ZS0 Gm43548-201ENSMUST00000197139 2353 ntBASIC20.42■□□□□ 0.86
Pdzrn3Q69ZS0 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pdzrn3Q69ZS0 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC20.42■□□□□ 0.86
Pdzrn3Q69ZS0 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Pdzrn3Q69ZS0 Gm6443-201ENSMUST00000203599 874 ntBASIC20.42■□□□□ 0.86
Pdzrn3Q69ZS0 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pdzrn3Q69ZS0 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pdzrn3Q69ZS0 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Pdzrn3Q69ZS0 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pdzrn3Q69ZS0 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pdzrn3Q69ZS0 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pdzrn3Q69ZS0 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pdzrn3Q69ZS0 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC20.41■□□□□ 0.86
Pdzrn3Q69ZS0 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Pdzrn3Q69ZS0 Gm27459-201ENSMUST00000184860 107 ntBASIC20.41■□□□□ 0.86
Pdzrn3Q69ZS0 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC20.41■□□□□ 0.86
Pdzrn3Q69ZS0 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
Pdzrn3Q69ZS0 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Pdzrn3Q69ZS0 Tfap2a-209ENSMUST00000225180 1828 ntBASIC20.41■□□□□ 0.86
Pdzrn3Q69ZS0 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pdzrn3Q69ZS0 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
Pdzrn3Q69ZS0 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pdzrn3Q69ZS0 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Pdzrn3Q69ZS0 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
Pdzrn3Q69ZS0 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC20.4■□□□□ 0.86
Pdzrn3Q69ZS0 Gm16401-202ENSMUST00000197463 2074 ntBASIC20.4■□□□□ 0.86
Pdzrn3Q69ZS0 AC124569.2-201ENSMUST00000225998 818 ntBASIC20.4■□□□□ 0.86
Pdzrn3Q69ZS0 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Pdzrn3Q69ZS0 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Pdzrn3Q69ZS0 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pdzrn3Q69ZS0 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pdzrn3Q69ZS0 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pdzrn3Q69ZS0 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC20.39■□□□□ 0.86
Pdzrn3Q69ZS0 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Pdzrn3Q69ZS0 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Pdzrn3Q69ZS0 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
Pdzrn3Q69ZS0 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Pdzrn3Q69ZS0 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Pdzrn3Q69ZS0 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms