Protein–RNA interactions for Protein: Q640N4

Zfp248, Zinc finger protein 248, mousemouse

Predictions only

Length 576 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zfp248Q640N4 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Zfp248Q640N4 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Zfp248Q640N4 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC12.73□□□□□ -0.37
Zfp248Q640N4 Gm12085-201ENSMUST00000119263 940 ntBASIC12.73□□□□□ -0.37
Zfp248Q640N4 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Zfp248Q640N4 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Zfp248Q640N4 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC12.73□□□□□ -0.37
Zfp248Q640N4 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC12.73□□□□□ -0.37
Zfp248Q640N4 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Zfp248Q640N4 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Zfp248Q640N4 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Zfp248Q640N4 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Zfp248Q640N4 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Zfp248Q640N4 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Zfp248Q640N4 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Zfp248Q640N4 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Zfp248Q640N4 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Zfp248Q640N4 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Zfp248Q640N4 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Zfp248Q640N4 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Zfp248Q640N4 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Zfp248Q640N4 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Zfp248Q640N4 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Zfp248Q640N4 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Zfp248Q640N4 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Zfp248Q640N4 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Zfp248Q640N4 Gm13168-201ENSMUST00000121771 632 ntBASIC12.72□□□□□ -0.37
Zfp248Q640N4 Gm12669-201ENSMUST00000122162 1009 ntBASIC12.72□□□□□ -0.37
Zfp248Q640N4 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Zfp248Q640N4 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Zfp248Q640N4 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Zfp248Q640N4 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Zfp248Q640N4 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC12.72□□□□□ -0.37
Zfp248Q640N4 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC12.72□□□□□ -0.37
Zfp248Q640N4 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Zfp248Q640N4 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Zfp248Q640N4 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC12.72□□□□□ -0.37
Zfp248Q640N4 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Zfp248Q640N4 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Zfp248Q640N4 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Zfp248Q640N4 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC12.72□□□□□ -0.37
Zfp248Q640N4 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Zfp248Q640N4 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Zfp248Q640N4 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC12.72□□□□□ -0.37
Zfp248Q640N4 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Zfp248Q640N4 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Zfp248Q640N4 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Zfp248Q640N4 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Zfp248Q640N4 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Zfp248Q640N4 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Zfp248Q640N4 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Zfp248Q640N4 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Zfp248Q640N4 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Zfp248Q640N4 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Zfp248Q640N4 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC12.71□□□□□ -0.37
Zfp248Q640N4 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Zfp248Q640N4 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Zfp248Q640N4 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Zfp248Q640N4 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Zfp248Q640N4 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Zfp248Q640N4 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Zfp248Q640N4 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Zfp248Q640N4 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Zfp248Q640N4 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Zfp248Q640N4 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
Zfp248Q640N4 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Zfp248Q640N4 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Zfp248Q640N4 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
Zfp248Q640N4 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC12.7□□□□□ -0.38
Zfp248Q640N4 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Zfp248Q640N4 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Zfp248Q640N4 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC12.7□□□□□ -0.38
Zfp248Q640N4 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC12.7□□□□□ -0.38
Zfp248Q640N4 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Zfp248Q640N4 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC12.7□□□□□ -0.38
Zfp248Q640N4 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Zfp248Q640N4 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Zfp248Q640N4 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Zfp248Q640N4 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC12.7□□□□□ -0.38
Zfp248Q640N4 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Zfp248Q640N4 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Zfp248Q640N4 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Zfp248Q640N4 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Zfp248Q640N4 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Zfp248Q640N4 Mir1199-201ENSMUST00000117015 119 ntBASIC12.7□□□□□ -0.38
Zfp248Q640N4 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Zfp248Q640N4 Gm7638-201ENSMUST00000121348 967 ntBASIC12.7□□□□□ -0.38
Zfp248Q640N4 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Zfp248Q640N4 Gm38027-201ENSMUST00000192315 235 ntBASIC12.7□□□□□ -0.38
Zfp248Q640N4 AC175538.1-201ENSMUST00000225343 1269 ntBASIC12.7□□□□□ -0.38
Zfp248Q640N4 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Zfp248Q640N4 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Zfp248Q640N4 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Zfp248Q640N4 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Zfp248Q640N4 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Zfp248Q640N4 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Zfp248Q640N4 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC12.7□□□□□ -0.38
Zfp248Q640N4 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
Zfp248Q640N4 AL590614.2-201ENSMUST00000225374 1937 ntBASIC12.7□□□□□ -0.38
Zfp248Q640N4 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms