Protein–RNA interactions for Protein: Q62425

Ndufa4, Cytochrome c oxidase subunit NDUFA4, mousemouse

Known RBP Predictions only

Length 82 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufa4Q62425 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ndufa4Q62425 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Ndufa4Q62425 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ndufa4Q62425 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ndufa4Q62425 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ndufa4Q62425 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ndufa4Q62425 Mir6349-201ENSMUST00000184059 97 ntBASIC12.16□□□□□ -0.46
Ndufa4Q62425 Gm7291-201ENSMUST00000199147 382 ntBASIC12.16□□□□□ -0.46
Ndufa4Q62425 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Ndufa4Q62425 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Ndufa4Q62425 Gm10493-201ENSMUST00000097270 612 ntBASIC12.16□□□□□ -0.46
Ndufa4Q62425 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ndufa4Q62425 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ndufa4Q62425 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ndufa4Q62425 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ndufa4Q62425 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ndufa4Q62425 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC12.16□□□□□ -0.46
Ndufa4Q62425 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ndufa4Q62425 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ndufa4Q62425 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ndufa4Q62425 Gm43072-201ENSMUST00000200283 1671 ntBASIC12.16□□□□□ -0.46
Ndufa4Q62425 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC12.16□□□□□ -0.46
Ndufa4Q62425 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ndufa4Q62425 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ndufa4Q62425 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Ndufa4Q62425 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ndufa4Q62425 Gm9867-201ENSMUST00000192212 2647 ntBASIC12.15□□□□□ -0.46
Ndufa4Q62425 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC12.15□□□□□ -0.46
Ndufa4Q62425 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ndufa4Q62425 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ndufa4Q62425 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ndufa4Q62425 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ndufa4Q62425 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC12.15□□□□□ -0.46
Ndufa4Q62425 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Ndufa4Q62425 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
Ndufa4Q62425 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC12.15□□□□□ -0.46
Ndufa4Q62425 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC12.15□□□□□ -0.46
Ndufa4Q62425 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Ndufa4Q62425 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC12.15□□□□□ -0.46
Ndufa4Q62425 AC099934.2-201ENSMUST00000196389 70 ntBASIC12.15□□□□□ -0.46
Ndufa4Q62425 AC156953.1-201ENSMUST00000196953 70 ntBASIC12.15□□□□□ -0.46
Ndufa4Q62425 AC157822.2-201ENSMUST00000200291 70 ntBASIC12.15□□□□□ -0.46
Ndufa4Q62425 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ndufa4Q62425 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ndufa4Q62425 Gm6365-201ENSMUST00000054711 744 ntBASIC12.15□□□□□ -0.46
Ndufa4Q62425 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ndufa4Q62425 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ndufa4Q62425 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ndufa4Q62425 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ndufa4Q62425 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ndufa4Q62425 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ndufa4Q62425 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Ndufa4Q62425 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Ndufa4Q62425 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ndufa4Q62425 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Ndufa4Q62425 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ndufa4Q62425 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ndufa4Q62425 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Ndufa4Q62425 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ndufa4Q62425 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ndufa4Q62425 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ndufa4Q62425 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ndufa4Q62425 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ndufa4Q62425 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC12.14□□□□□ -0.47
Ndufa4Q62425 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Ndufa4Q62425 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ndufa4Q62425 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ndufa4Q62425 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ndufa4Q62425 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ndufa4Q62425 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ndufa4Q62425 Gm44443-201ENSMUST00000204396 5633 ntBASIC12.14□□□□□ -0.47
Ndufa4Q62425 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ndufa4Q62425 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC12.14□□□□□ -0.47
Ndufa4Q62425 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC12.14□□□□□ -0.47
Ndufa4Q62425 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC12.14□□□□□ -0.47
Ndufa4Q62425 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC12.14□□□□□ -0.47
Ndufa4Q62425 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ndufa4Q62425 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ndufa4Q62425 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC12.14□□□□□ -0.47
Ndufa4Q62425 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC12.14□□□□□ -0.47
Ndufa4Q62425 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ndufa4Q62425 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ndufa4Q62425 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ndufa4Q62425 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ndufa4Q62425 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ndufa4Q62425 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC12.14□□□□□ -0.47
Ndufa4Q62425 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ndufa4Q62425 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC12.13□□□□□ -0.47
Ndufa4Q62425 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ndufa4Q62425 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ndufa4Q62425 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ndufa4Q62425 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC12.13□□□□□ -0.47
Ndufa4Q62425 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ndufa4Q62425 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Ndufa4Q62425 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Ndufa4Q62425 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ndufa4Q62425 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ndufa4Q62425 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ndufa4Q62425 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ndufa4Q62425 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms