Protein–RNA interactions for Protein: Q62249

Sox19, Protein SOX-19 (Fragment), mousemouse

Predictions only

Length 55 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox19Q62249 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
Sox19Q62249 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Sox19Q62249 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sox19Q62249 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sox19Q62249 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Sox19Q62249 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sox19Q62249 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Sox19Q62249 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Sox19Q62249 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC14.31□□□□□ -0.12
Sox19Q62249 Gm5408-201ENSMUST00000197998 747 ntBASIC14.31□□□□□ -0.12
Sox19Q62249 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Sox19Q62249 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sox19Q62249 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sox19Q62249 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sox19Q62249 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC14.31□□□□□ -0.12
Sox19Q62249 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC14.31□□□□□ -0.12
Sox19Q62249 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sox19Q62249 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sox19Q62249 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Sox19Q62249 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox19Q62249 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Sox19Q62249 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC14.3□□□□□ -0.12
Sox19Q62249 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox19Q62249 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox19Q62249 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox19Q62249 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox19Q62249 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC14.3□□□□□ -0.12
Sox19Q62249 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox19Q62249 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Sox19Q62249 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Sox19Q62249 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox19Q62249 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Sox19Q62249 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
Sox19Q62249 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Sox19Q62249 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Sox19Q62249 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Sox19Q62249 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Sox19Q62249 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox19Q62249 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox19Q62249 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox19Q62249 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Sox19Q62249 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox19Q62249 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox19Q62249 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox19Q62249 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Sox19Q62249 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC14.29□□□□□ -0.12
Sox19Q62249 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Sox19Q62249 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC14.29□□□□□ -0.12
Sox19Q62249 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox19Q62249 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox19Q62249 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox19Q62249 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Sox19Q62249 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC14.29□□□□□ -0.12
Sox19Q62249 Mtag2-201ENSMUST00000058665 714 ntBASIC14.29□□□□□ -0.12
Sox19Q62249 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Sox19Q62249 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC14.29□□□□□ -0.12
Sox19Q62249 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Sox19Q62249 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Sox19Q62249 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Sox19Q62249 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox19Q62249 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Sox19Q62249 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox19Q62249 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC14.29□□□□□ -0.12
Sox19Q62249 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Sox19Q62249 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Sox19Q62249 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC14.29□□□□□ -0.12
Sox19Q62249 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC14.29□□□□□ -0.12
Sox19Q62249 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox19Q62249 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC14.28□□□□□ -0.12
Sox19Q62249 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC14.28□□□□□ -0.12
Sox19Q62249 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Sox19Q62249 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox19Q62249 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC14.28□□□□□ -0.12
Sox19Q62249 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Sox19Q62249 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox19Q62249 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox19Q62249 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox19Q62249 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Sox19Q62249 Gm15375-201ENSMUST00000119510 849 ntBASIC14.28□□□□□ -0.12
Sox19Q62249 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Sox19Q62249 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Sox19Q62249 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC14.28□□□□□ -0.12
Sox19Q62249 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Sox19Q62249 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Sox19Q62249 Gm42555-201ENSMUST00000199304 1039 ntBASIC14.28□□□□□ -0.12
Sox19Q62249 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC14.28□□□□□ -0.12
Sox19Q62249 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox19Q62249 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox19Q62249 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox19Q62249 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
Sox19Q62249 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox19Q62249 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox19Q62249 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox19Q62249 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox19Q62249 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC14.28□□□□□ -0.12
Sox19Q62249 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Sox19Q62249 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC14.27□□□□□ -0.12
Sox19Q62249 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sox19Q62249 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sox19Q62249 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms