Protein–RNA interactions for Protein: Q62233

Six3, Homeobox protein SIX3, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six3Q62233 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Six3Q62233 Wnt10b-204ENSMUST00000226655 1807 ntBASIC16.35■□□□□ 0.21
Six3Q62233 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Six3Q62233 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Six3Q62233 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Six3Q62233 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
Six3Q62233 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Six3Q62233 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Six3Q62233 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Six3Q62233 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC16.34■□□□□ 0.21
Six3Q62233 Gm45203-201ENSMUST00000206384 1831 ntBASIC16.34■□□□□ 0.21
Six3Q62233 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC16.34■□□□□ 0.21
Six3Q62233 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Six3Q62233 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Six3Q62233 Gm715-201ENSMUST00000117865 831 ntBASIC16.34■□□□□ 0.21
Six3Q62233 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC16.34■□□□□ 0.21
Six3Q62233 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Six3Q62233 AC156016.1-201ENSMUST00000227190 1035 ntBASIC16.34■□□□□ 0.21
Six3Q62233 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Six3Q62233 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Six3Q62233 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Six3Q62233 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Six3Q62233 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Six3Q62233 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Six3Q62233 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Six3Q62233 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Six3Q62233 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Six3Q62233 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Six3Q62233 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
Six3Q62233 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
Six3Q62233 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Six3Q62233 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Six3Q62233 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Six3Q62233 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Six3Q62233 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
Six3Q62233 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Six3Q62233 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Six3Q62233 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Six3Q62233 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Six3Q62233 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Six3Q62233 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Six3Q62233 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Six3Q62233 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC16.33■□□□□ 0.2
Six3Q62233 Gm18958-201ENSMUST00000174258 762 ntBASIC16.33■□□□□ 0.2
Six3Q62233 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC16.33■□□□□ 0.2
Six3Q62233 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Six3Q62233 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Six3Q62233 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Six3Q62233 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
Six3Q62233 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Six3Q62233 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Six3Q62233 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Six3Q62233 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Six3Q62233 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Six3Q62233 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Six3Q62233 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC16.33■□□□□ 0.2
Six3Q62233 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Six3Q62233 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Six3Q62233 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Six3Q62233 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC16.32■□□□□ 0.2
Six3Q62233 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Six3Q62233 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Six3Q62233 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Six3Q62233 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Six3Q62233 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC16.32■□□□□ 0.2
Six3Q62233 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Six3Q62233 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Six3Q62233 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Six3Q62233 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Six3Q62233 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Six3Q62233 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Six3Q62233 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC16.32■□□□□ 0.2
Six3Q62233 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Six3Q62233 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Six3Q62233 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Six3Q62233 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Six3Q62233 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Six3Q62233 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Six3Q62233 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Six3Q62233 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC16.32■□□□□ 0.2
Six3Q62233 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Six3Q62233 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Six3Q62233 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Six3Q62233 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Six3Q62233 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Six3Q62233 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Six3Q62233 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Six3Q62233 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Six3Q62233 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Six3Q62233 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Six3Q62233 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Six3Q62233 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC16.31■□□□□ 0.2
Six3Q62233 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC16.31■□□□□ 0.2
Six3Q62233 Gm13181-201ENSMUST00000120117 1069 ntBASIC16.31■□□□□ 0.2
Six3Q62233 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC16.31■□□□□ 0.2
Six3Q62233 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC16.31■□□□□ 0.2
Six3Q62233 Gm3375-201ENSMUST00000203929 796 ntBASIC16.31■□□□□ 0.2
Six3Q62233 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Six3Q62233 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC16.31■□□□□ 0.2
Six3Q62233 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms