Protein–RNA interactions for Protein: Q61508

Ecm1, Extracellular matrix protein 1, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ecm1Q61508 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
Ecm1Q61508 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC18.49■□□□□ 0.55
Ecm1Q61508 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC18.49■□□□□ 0.55
Ecm1Q61508 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
Ecm1Q61508 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC18.49■□□□□ 0.55
Ecm1Q61508 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ecm1Q61508 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ecm1Q61508 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ecm1Q61508 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ecm1Q61508 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Ecm1Q61508 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
Ecm1Q61508 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ecm1Q61508 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Ecm1Q61508 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
Ecm1Q61508 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ecm1Q61508 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Ecm1Q61508 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.48■□□□□ 0.55
Ecm1Q61508 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Ecm1Q61508 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC18.48■□□□□ 0.55
Ecm1Q61508 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC18.48■□□□□ 0.55
Ecm1Q61508 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ecm1Q61508 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ecm1Q61508 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ecm1Q61508 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Ecm1Q61508 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Ecm1Q61508 Gm37935-201ENSMUST00000192012 982 ntBASIC18.48■□□□□ 0.55
Ecm1Q61508 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC18.48■□□□□ 0.55
Ecm1Q61508 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Ecm1Q61508 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ecm1Q61508 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ecm1Q61508 AC127349.1-201ENSMUST00000224590 266 ntBASIC18.48■□□□□ 0.55
Ecm1Q61508 Rbfox2-207ENSMUST00000227533 1041 ntBASIC18.48■□□□□ 0.55
Ecm1Q61508 AC114585.2-202ENSMUST00000228094 426 ntBASIC18.48■□□□□ 0.55
Ecm1Q61508 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Ecm1Q61508 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ecm1Q61508 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ecm1Q61508 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Ecm1Q61508 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ecm1Q61508 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ecm1Q61508 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ecm1Q61508 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC18.47■□□□□ 0.55
Ecm1Q61508 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Ecm1Q61508 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Ecm1Q61508 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Ecm1Q61508 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ecm1Q61508 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Ecm1Q61508 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ecm1Q61508 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Ecm1Q61508 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ecm1Q61508 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Ecm1Q61508 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC18.47■□□□□ 0.55
Ecm1Q61508 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Ecm1Q61508 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC18.47■□□□□ 0.55
Ecm1Q61508 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC18.47■□□□□ 0.55
Ecm1Q61508 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ecm1Q61508 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Ecm1Q61508 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ecm1Q61508 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ecm1Q61508 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Ecm1Q61508 Gm9889-202ENSMUST00000206983 1577 ntBASIC18.47■□□□□ 0.55
Ecm1Q61508 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Ecm1Q61508 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ecm1Q61508 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ecm1Q61508 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC18.46■□□□□ 0.55
Ecm1Q61508 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.46■□□□□ 0.55
Ecm1Q61508 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Ecm1Q61508 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
Ecm1Q61508 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ecm1Q61508 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC18.46■□□□□ 0.55
Ecm1Q61508 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC18.46■□□□□ 0.55
Ecm1Q61508 Gm43073-201ENSMUST00000198200 1189 ntBASIC18.46■□□□□ 0.55
Ecm1Q61508 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Ecm1Q61508 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Ecm1Q61508 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Ecm1Q61508 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ecm1Q61508 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ecm1Q61508 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Ecm1Q61508 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.46■□□□□ 0.55
Ecm1Q61508 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ecm1Q61508 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ecm1Q61508 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ecm1Q61508 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ecm1Q61508 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ecm1Q61508 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Ecm1Q61508 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Ecm1Q61508 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ecm1Q61508 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ecm1Q61508 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ecm1Q61508 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Ecm1Q61508 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ecm1Q61508 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Ecm1Q61508 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ecm1Q61508 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ecm1Q61508 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ecm1Q61508 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC18.45■□□□□ 0.54
Ecm1Q61508 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ecm1Q61508 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC18.45■□□□□ 0.54
Ecm1Q61508 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ecm1Q61508 Zcchc6-207ENSMUST00000225576 2499 ntBASIC18.45■□□□□ 0.54
Ecm1Q61508 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms