Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC15.74■□□□□ 0.11
Sox17Q61473 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Sox17Q61473 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Sox17Q61473 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sox17Q61473 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sox17Q61473 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Sox17Q61473 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sox17Q61473 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sox17Q61473 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sox17Q61473 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Sox17Q61473 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Sox17Q61473 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Sox17Q61473 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Sox17Q61473 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sox17Q61473 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sox17Q61473 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
Sox17Q61473 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC15.74■□□□□ 0.11
Sox17Q61473 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Sox17Q61473 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sox17Q61473 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
Sox17Q61473 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sox17Q61473 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sox17Q61473 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sox17Q61473 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Sox17Q61473 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sox17Q61473 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sox17Q61473 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sox17Q61473 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Sox17Q61473 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Sox17Q61473 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Sox17Q61473 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sox17Q61473 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sox17Q61473 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC15.73■□□□□ 0.11
Sox17Q61473 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sox17Q61473 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sox17Q61473 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Sox17Q61473 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC15.73■□□□□ 0.11
Sox17Q61473 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Sox17Q61473 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sox17Q61473 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sox17Q61473 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
Sox17Q61473 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Sox17Q61473 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC15.73■□□□□ 0.11
Sox17Q61473 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sox17Q61473 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sox17Q61473 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sox17Q61473 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC15.72■□□□□ 0.11
Sox17Q61473 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Sox17Q61473 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sox17Q61473 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC15.72■□□□□ 0.11
Sox17Q61473 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sox17Q61473 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC15.72■□□□□ 0.11
Sox17Q61473 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Sox17Q61473 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Sox17Q61473 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sox17Q61473 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sox17Q61473 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sox17Q61473 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sox17Q61473 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sox17Q61473 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Sox17Q61473 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Sox17Q61473 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sox17Q61473 Gm45560-201ENSMUST00000211492 1472 ntBASIC15.71■□□□□ 0.11
Sox17Q61473 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sox17Q61473 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
Sox17Q61473 Gm19430-201ENSMUST00000193847 2137 ntBASIC15.71■□□□□ 0.11
Sox17Q61473 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sox17Q61473 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Sox17Q61473 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Sox17Q61473 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sox17Q61473 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Sox17Q61473 Gm10849-201ENSMUST00000100397 618 ntBASIC15.71■□□□□ 0.11
Sox17Q61473 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC15.71■□□□□ 0.11
Sox17Q61473 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Sox17Q61473 Mir6349-201ENSMUST00000184059 97 ntBASIC15.71■□□□□ 0.11
Sox17Q61473 Gm5874-201ENSMUST00000096101 508 ntBASIC15.71■□□□□ 0.11
Sox17Q61473 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sox17Q61473 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Sox17Q61473 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Sox17Q61473 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sox17Q61473 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Sox17Q61473 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sox17Q61473 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sox17Q61473 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sox17Q61473 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC15.71■□□□□ 0.1
Sox17Q61473 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Sox17Q61473 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC15.71■□□□□ 0.1
Sox17Q61473 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Sox17Q61473 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sox17Q61473 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Sox17Q61473 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Sox17Q61473 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sox17Q61473 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sox17Q61473 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Sox17Q61473 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
Sox17Q61473 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Sox17Q61473 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sox17Q61473 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Sox17Q61473 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sox17Q61473 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms