Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC17.44■□□□□ 0.38
Smarcd1Q61466 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smarcd1Q61466 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smarcd1Q61466 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Smarcd1Q61466 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smarcd1Q61466 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.44■□□□□ 0.38
Smarcd1Q61466 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Smarcd1Q61466 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smarcd1Q61466 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Smarcd1Q61466 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.43■□□□□ 0.38
Smarcd1Q61466 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Smarcd1Q61466 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC17.43■□□□□ 0.38
Smarcd1Q61466 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Smarcd1Q61466 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC17.43■□□□□ 0.38
Smarcd1Q61466 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Smarcd1Q61466 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Smarcd1Q61466 Gm27704-201ENSMUST00000185094 107 ntBASIC17.43■□□□□ 0.38
Smarcd1Q61466 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC17.43■□□□□ 0.38
Smarcd1Q61466 AC130713.1-201ENSMUST00000228853 1096 ntBASIC17.43■□□□□ 0.38
Smarcd1Q61466 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Smarcd1Q61466 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Smarcd1Q61466 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Smarcd1Q61466 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Smarcd1Q61466 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Smarcd1Q61466 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Smarcd1Q61466 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Smarcd1Q61466 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Smarcd1Q61466 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Smarcd1Q61466 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC17.42■□□□□ 0.38
Smarcd1Q61466 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smarcd1Q61466 Gm45328-201ENSMUST00000210942 917 ntBASIC17.42■□□□□ 0.38
Smarcd1Q61466 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Smarcd1Q61466 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smarcd1Q61466 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smarcd1Q61466 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Smarcd1Q61466 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smarcd1Q61466 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smarcd1Q61466 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smarcd1Q61466 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smarcd1Q61466 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Smarcd1Q61466 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smarcd1Q61466 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smarcd1Q61466 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smarcd1Q61466 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Smarcd1Q61466 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smarcd1Q61466 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smarcd1Q61466 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smarcd1Q61466 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smarcd1Q61466 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smarcd1Q61466 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smarcd1Q61466 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Smarcd1Q61466 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Smarcd1Q61466 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Smarcd1Q61466 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smarcd1Q61466 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smarcd1Q61466 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Smarcd1Q61466 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smarcd1Q61466 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smarcd1Q61466 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC17.4■□□□□ 0.38
Smarcd1Q61466 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Smarcd1Q61466 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Smarcd1Q61466 Gm16401-202ENSMUST00000197463 2074 ntBASIC17.4■□□□□ 0.38
Smarcd1Q61466 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC17.4■□□□□ 0.38
Smarcd1Q61466 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smarcd1Q61466 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Smarcd1Q61466 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smarcd1Q61466 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smarcd1Q61466 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smarcd1Q61466 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.4■□□□□ 0.38
Smarcd1Q61466 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smarcd1Q61466 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Smarcd1Q61466 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Smarcd1Q61466 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Smarcd1Q61466 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Smarcd1Q61466 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC17.39■□□□□ 0.37
Smarcd1Q61466 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC17.39■□□□□ 0.37
Smarcd1Q61466 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Smarcd1Q61466 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Smarcd1Q61466 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Smarcd1Q61466 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Smarcd1Q61466 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Smarcd1Q61466 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Smarcd1Q61466 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC17.39■□□□□ 0.37
Smarcd1Q61466 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Smarcd1Q61466 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Smarcd1Q61466 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Smarcd1Q61466 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Smarcd1Q61466 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Smarcd1Q61466 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Smarcd1Q61466 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smarcd1Q61466 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Smarcd1Q61466 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smarcd1Q61466 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smarcd1Q61466 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Smarcd1Q61466 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smarcd1Q61466 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Smarcd1Q61466 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smarcd1Q61466 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smarcd1Q61466 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Smarcd1Q61466 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms