Protein–RNA interactions for Protein: Q61418

Clcn4, H(+)/Cl(-) exchange transporter 4, mousemouse

Predictions only

Length 747 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn4Q61418 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Clcn4Q61418 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Clcn4Q61418 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Clcn4Q61418 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Clcn4Q61418 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Clcn4Q61418 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Clcn4Q61418 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Clcn4Q61418 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Clcn4Q61418 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Clcn4Q61418 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC15.43■□□□□ 0.06
Clcn4Q61418 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Clcn4Q61418 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Clcn4Q61418 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC15.42■□□□□ 0.06
Clcn4Q61418 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Clcn4Q61418 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Clcn4Q61418 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Clcn4Q61418 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Clcn4Q61418 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Clcn4Q61418 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Clcn4Q61418 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Clcn4Q61418 Gm13216-201ENSMUST00000117145 591 ntBASIC15.42■□□□□ 0.06
Clcn4Q61418 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Clcn4Q61418 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Clcn4Q61418 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Clcn4Q61418 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Clcn4Q61418 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Clcn4Q61418 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Clcn4Q61418 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Clcn4Q61418 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Clcn4Q61418 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Clcn4Q61418 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Clcn4Q61418 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Clcn4Q61418 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Clcn4Q61418 Gm19721-201ENSMUST00000195284 1764 ntBASIC15.41■□□□□ 0.06
Clcn4Q61418 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Clcn4Q61418 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Clcn4Q61418 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
Clcn4Q61418 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Clcn4Q61418 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Clcn4Q61418 Gm11620-201ENSMUST00000118770 1845 ntBASIC15.41■□□□□ 0.06
Clcn4Q61418 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Clcn4Q61418 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Clcn4Q61418 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Clcn4Q61418 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Clcn4Q61418 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Clcn4Q61418 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC15.41■□□□□ 0.06
Clcn4Q61418 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Clcn4Q61418 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Clcn4Q61418 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Clcn4Q61418 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Clcn4Q61418 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Clcn4Q61418 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC15.41■□□□□ 0.06
Clcn4Q61418 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC15.41■□□□□ 0.06
Clcn4Q61418 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Clcn4Q61418 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Clcn4Q61418 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Clcn4Q61418 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC15.41■□□□□ 0.06
Clcn4Q61418 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Clcn4Q61418 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Clcn4Q61418 Gm9694-201ENSMUST00000193347 1189 ntBASIC15.41■□□□□ 0.06
Clcn4Q61418 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Clcn4Q61418 AC175538.1-201ENSMUST00000225343 1269 ntBASIC15.41■□□□□ 0.06
Clcn4Q61418 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Clcn4Q61418 Gm5417-201ENSMUST00000079706 384 ntBASIC15.41■□□□□ 0.06
Clcn4Q61418 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Clcn4Q61418 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Clcn4Q61418 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Clcn4Q61418 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Clcn4Q61418 Hivep3-201ENSMUST00000084306 2973 ntBASIC15.41■□□□□ 0.06
Clcn4Q61418 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Clcn4Q61418 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Clcn4Q61418 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Clcn4Q61418 Gm26917-202ENSMUST00000192833 3329 ntBASIC15.4■□□□□ 0.06
Clcn4Q61418 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Clcn4Q61418 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Clcn4Q61418 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Clcn4Q61418 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
Clcn4Q61418 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Clcn4Q61418 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Clcn4Q61418 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Clcn4Q61418 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC15.4■□□□□ 0.06
Clcn4Q61418 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Clcn4Q61418 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Clcn4Q61418 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Clcn4Q61418 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC15.4■□□□□ 0.06
Clcn4Q61418 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Clcn4Q61418 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Clcn4Q61418 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Clcn4Q61418 Gm37166-201ENSMUST00000195473 2474 ntBASIC15.39■□□□□ 0.05
Clcn4Q61418 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Clcn4Q61418 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC15.39■□□□□ 0.05
Clcn4Q61418 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Clcn4Q61418 AC153881.2-201ENSMUST00000214877 204 ntBASIC15.39■□□□□ 0.05
Clcn4Q61418 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Clcn4Q61418 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Clcn4Q61418 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Clcn4Q61418 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC15.39■□□□□ 0.05
Clcn4Q61418 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC15.39■□□□□ 0.05
Clcn4Q61418 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Clcn4Q61418 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 14.6 ms