Protein–RNA interactions for Protein: Q61382

Traf4, TNF receptor-associated factor 4, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf4Q61382 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Traf4Q61382 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
Traf4Q61382 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Traf4Q61382 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Traf4Q61382 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Traf4Q61382 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Traf4Q61382 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Traf4Q61382 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Traf4Q61382 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Traf4Q61382 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Traf4Q61382 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Traf4Q61382 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Traf4Q61382 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Traf4Q61382 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Traf4Q61382 Gm2274-201ENSMUST00000184539 609 ntBASIC14.83□□□□□ -0.04
Traf4Q61382 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Traf4Q61382 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Traf4Q61382 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC14.83□□□□□ -0.04
Traf4Q61382 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Traf4Q61382 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Traf4Q61382 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Traf4Q61382 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Traf4Q61382 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Traf4Q61382 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Traf4Q61382 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Traf4Q61382 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Traf4Q61382 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Traf4Q61382 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC14.82□□□□□ -0.04
Traf4Q61382 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Traf4Q61382 Tgds-204ENSMUST00000228543 1594 ntBASIC14.82□□□□□ -0.04
Traf4Q61382 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Traf4Q61382 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Traf4Q61382 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Traf4Q61382 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Traf4Q61382 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Traf4Q61382 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Traf4Q61382 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC14.82□□□□□ -0.04
Traf4Q61382 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Traf4Q61382 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Traf4Q61382 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Traf4Q61382 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Traf4Q61382 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
Traf4Q61382 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Traf4Q61382 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Traf4Q61382 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Traf4Q61382 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Traf4Q61382 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Traf4Q61382 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Traf4Q61382 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Traf4Q61382 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC14.81□□□□□ -0.04
Traf4Q61382 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Traf4Q61382 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Traf4Q61382 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Traf4Q61382 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Traf4Q61382 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC14.81□□□□□ -0.04
Traf4Q61382 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Traf4Q61382 Gm10013-201ENSMUST00000106074 672 ntBASIC14.81□□□□□ -0.04
Traf4Q61382 Mir5130-201ENSMUST00000175160 84 ntBASIC14.81□□□□□ -0.04
Traf4Q61382 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC14.81□□□□□ -0.04
Traf4Q61382 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC14.81□□□□□ -0.04
Traf4Q61382 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Traf4Q61382 Gm18032-201ENSMUST00000222541 538 ntBASIC14.81□□□□□ -0.04
Traf4Q61382 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Traf4Q61382 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC14.81□□□□□ -0.04
Traf4Q61382 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Traf4Q61382 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Traf4Q61382 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Traf4Q61382 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Traf4Q61382 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Traf4Q61382 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC14.81□□□□□ -0.04
Traf4Q61382 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Traf4Q61382 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Traf4Q61382 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC14.81□□□□□ -0.04
Traf4Q61382 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Traf4Q61382 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Traf4Q61382 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC14.81□□□□□ -0.04
Traf4Q61382 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Traf4Q61382 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Traf4Q61382 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Traf4Q61382 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Traf4Q61382 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Traf4Q61382 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
Traf4Q61382 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC14.8□□□□□ -0.04
Traf4Q61382 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Traf4Q61382 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Traf4Q61382 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Traf4Q61382 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Traf4Q61382 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Traf4Q61382 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Traf4Q61382 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Traf4Q61382 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC14.8□□□□□ -0.04
Traf4Q61382 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC14.8□□□□□ -0.04
Traf4Q61382 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Traf4Q61382 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Traf4Q61382 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Traf4Q61382 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Traf4Q61382 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Traf4Q61382 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Traf4Q61382 Gm13401-201ENSMUST00000117074 291 ntBASIC14.79□□□□□ -0.04
Traf4Q61382 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms