Protein–RNA interactions for Protein: Q61361

Bcan, Brevican core protein, mousemouse

Predictions only

Length 883 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BcanQ61361 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
BcanQ61361 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC20.61■□□□□ 0.89
BcanQ61361 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
BcanQ61361 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC20.61■□□□□ 0.89
BcanQ61361 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
BcanQ61361 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
BcanQ61361 Tfap2a-209ENSMUST00000225180 1828 ntBASIC20.6■□□□□ 0.89
BcanQ61361 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
BcanQ61361 Rarb-207ENSMUST00000225921 2756 ntBASIC20.6■□□□□ 0.89
BcanQ61361 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
BcanQ61361 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
BcanQ61361 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
BcanQ61361 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
BcanQ61361 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
BcanQ61361 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC20.6■□□□□ 0.89
BcanQ61361 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
BcanQ61361 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
BcanQ61361 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
BcanQ61361 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
BcanQ61361 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
BcanQ61361 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
BcanQ61361 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC20.6■□□□□ 0.89
BcanQ61361 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
BcanQ61361 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
BcanQ61361 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
BcanQ61361 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC20.59■□□□□ 0.89
BcanQ61361 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
BcanQ61361 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
BcanQ61361 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
BcanQ61361 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC20.59■□□□□ 0.89
BcanQ61361 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
BcanQ61361 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
BcanQ61361 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC20.59■□□□□ 0.89
BcanQ61361 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
BcanQ61361 Gm45203-201ENSMUST00000206384 1831 ntBASIC20.59■□□□□ 0.89
BcanQ61361 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
BcanQ61361 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
BcanQ61361 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
BcanQ61361 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
BcanQ61361 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
BcanQ61361 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
BcanQ61361 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
BcanQ61361 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
BcanQ61361 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
BcanQ61361 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
BcanQ61361 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
BcanQ61361 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC20.58■□□□□ 0.89
BcanQ61361 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC20.58■□□□□ 0.89
BcanQ61361 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC20.58■□□□□ 0.89
BcanQ61361 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
BcanQ61361 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
BcanQ61361 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.88
BcanQ61361 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.88
BcanQ61361 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC20.58■□□□□ 0.88
BcanQ61361 AL590614.2-201ENSMUST00000225374 1937 ntBASIC20.58■□□□□ 0.88
BcanQ61361 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
BcanQ61361 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
BcanQ61361 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
BcanQ61361 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
BcanQ61361 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
BcanQ61361 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
BcanQ61361 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
BcanQ61361 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
BcanQ61361 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
BcanQ61361 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
BcanQ61361 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC20.57■□□□□ 0.88
BcanQ61361 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
BcanQ61361 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC20.57■□□□□ 0.88
BcanQ61361 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC20.57■□□□□ 0.88
BcanQ61361 Gm29707-201ENSMUST00000196325 491 ntBASIC20.57■□□□□ 0.88
BcanQ61361 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
BcanQ61361 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
BcanQ61361 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
BcanQ61361 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
BcanQ61361 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
BcanQ61361 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
BcanQ61361 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
BcanQ61361 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
BcanQ61361 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
BcanQ61361 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
BcanQ61361 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
BcanQ61361 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
BcanQ61361 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
BcanQ61361 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
BcanQ61361 Gm12895-201ENSMUST00000122214 226 ntBASIC20.56■□□□□ 0.88
BcanQ61361 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC20.56■□□□□ 0.88
BcanQ61361 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC20.56■□□□□ 0.88
BcanQ61361 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC20.56■□□□□ 0.88
BcanQ61361 AC125350.1-201ENSMUST00000225115 903 ntBASIC20.56■□□□□ 0.88
BcanQ61361 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
BcanQ61361 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
BcanQ61361 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
BcanQ61361 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
BcanQ61361 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
BcanQ61361 Gfra2-202ENSMUST00000227633 1480 ntBASIC20.56■□□□□ 0.88
BcanQ61361 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
BcanQ61361 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
BcanQ61361 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
BcanQ61361 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
BcanQ61361 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms