Protein–RNA interactions for Protein: Q5U430

Ubr3, E3 ubiquitin-protein ligase UBR3, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3Q5U430 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ubr3Q5U430 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ubr3Q5U430 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
Ubr3Q5U430 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Ubr3Q5U430 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ubr3Q5U430 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Ubr3Q5U430 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ubr3Q5U430 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC20.26■□□□□ 0.83
Ubr3Q5U430 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC20.26■□□□□ 0.83
Ubr3Q5U430 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Ubr3Q5U430 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Ubr3Q5U430 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC20.26■□□□□ 0.83
Ubr3Q5U430 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Ubr3Q5U430 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC20.26■□□□□ 0.83
Ubr3Q5U430 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Ubr3Q5U430 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC20.26■□□□□ 0.83
Ubr3Q5U430 AC124549.3-201ENSMUST00000225541 367 ntBASIC20.26■□□□□ 0.83
Ubr3Q5U430 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC20.25■□□□□ 0.83
Ubr3Q5U430 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ubr3Q5U430 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ubr3Q5U430 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ubr3Q5U430 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ubr3Q5U430 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC20.25■□□□□ 0.83
Ubr3Q5U430 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC20.25■□□□□ 0.83
Ubr3Q5U430 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ubr3Q5U430 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Ubr3Q5U430 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ubr3Q5U430 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ubr3Q5U430 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ubr3Q5U430 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Ubr3Q5U430 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC20.24■□□□□ 0.83
Ubr3Q5U430 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC20.24■□□□□ 0.83
Ubr3Q5U430 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Ubr3Q5U430 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC20.24■□□□□ 0.83
Ubr3Q5U430 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ubr3Q5U430 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ubr3Q5U430 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC20.24■□□□□ 0.83
Ubr3Q5U430 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Ubr3Q5U430 Gm15500-202ENSMUST00000071641 1019 ntBASIC20.24■□□□□ 0.83
Ubr3Q5U430 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ubr3Q5U430 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ubr3Q5U430 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ubr3Q5U430 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ubr3Q5U430 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ubr3Q5U430 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ubr3Q5U430 Gm4913-201ENSMUST00000117075 1290 ntBASIC20.23■□□□□ 0.83
Ubr3Q5U430 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ubr3Q5U430 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Ubr3Q5U430 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ubr3Q5U430 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ubr3Q5U430 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC20.23■□□□□ 0.83
Ubr3Q5U430 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ubr3Q5U430 Gm11873-201ENSMUST00000117877 1304 ntBASIC20.23■□□□□ 0.83
Ubr3Q5U430 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ubr3Q5U430 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Ubr3Q5U430 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC20.22■□□□□ 0.83
Ubr3Q5U430 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Ubr3Q5U430 AC174742.1-201ENSMUST00000218272 304 ntBASIC20.22■□□□□ 0.83
Ubr3Q5U430 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Ubr3Q5U430 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ubr3Q5U430 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ubr3Q5U430 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ubr3Q5U430 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC20.22■□□□□ 0.83
Ubr3Q5U430 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ubr3Q5U430 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ubr3Q5U430 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC20.22■□□□□ 0.83
Ubr3Q5U430 AC159114.1-201ENSMUST00000220349 266 ntBASIC20.22■□□□□ 0.83
Ubr3Q5U430 AC158982.1-201ENSMUST00000228377 901 ntBASIC20.22■□□□□ 0.83
Ubr3Q5U430 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ubr3Q5U430 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Ubr3Q5U430 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ubr3Q5U430 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ubr3Q5U430 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ubr3Q5U430 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ubr3Q5U430 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Ubr3Q5U430 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ubr3Q5U430 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ubr3Q5U430 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ubr3Q5U430 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Ubr3Q5U430 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ubr3Q5U430 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ubr3Q5U430 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Ubr3Q5U430 Gm8655-201ENSMUST00000221159 852 ntBASIC20.21■□□□□ 0.83
Ubr3Q5U430 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ubr3Q5U430 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ubr3Q5U430 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ubr3Q5U430 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Ubr3Q5U430 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC20.21■□□□□ 0.83
Ubr3Q5U430 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
Ubr3Q5U430 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Ubr3Q5U430 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Ubr3Q5U430 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ubr3Q5U430 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Ubr3Q5U430 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ubr3Q5U430 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ubr3Q5U430 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ubr3Q5U430 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ubr3Q5U430 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ubr3Q5U430 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ubr3Q5U430 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms