Protein–RNA interactions for Protein: Q5R1I1

Trav7d-3, T cell receptor alpha variable 7-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-3Q5R1I1 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav7d-3Q5R1I1 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav7d-3Q5R1I1 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav7d-3Q5R1I1 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav7d-3Q5R1I1 Tfap2a-209ENSMUST00000225180 1828 ntBASIC12.32□□□□□ -0.44
Trav7d-3Q5R1I1 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav7d-3Q5R1I1 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC12.32□□□□□ -0.44
Trav7d-3Q5R1I1 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav7d-3Q5R1I1 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav7d-3Q5R1I1 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC12.32□□□□□ -0.44
Trav7d-3Q5R1I1 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav7d-3Q5R1I1 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC12.32□□□□□ -0.44
Trav7d-3Q5R1I1 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC12.32□□□□□ -0.44
Trav7d-3Q5R1I1 Gm15378-201ENSMUST00000121894 207 ntBASIC12.32□□□□□ -0.44
Trav7d-3Q5R1I1 Gm24841-201ENSMUST00000158676 357 ntBASIC12.32□□□□□ -0.44
Trav7d-3Q5R1I1 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav7d-3Q5R1I1 Gm37025-201ENSMUST00000195159 829 ntBASIC12.32□□□□□ -0.44
Trav7d-3Q5R1I1 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav7d-3Q5R1I1 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Trav7d-3Q5R1I1 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Trav7d-3Q5R1I1 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav7d-3Q5R1I1 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav7d-3Q5R1I1 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Trav7d-3Q5R1I1 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav7d-3Q5R1I1 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Trav7d-3Q5R1I1 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav7d-3Q5R1I1 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav7d-3Q5R1I1 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav7d-3Q5R1I1 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Trav7d-3Q5R1I1 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav7d-3Q5R1I1 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav7d-3Q5R1I1 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav7d-3Q5R1I1 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav7d-3Q5R1I1 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav7d-3Q5R1I1 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC12.31□□□□□ -0.44
Trav7d-3Q5R1I1 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav7d-3Q5R1I1 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav7d-3Q5R1I1 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav7d-3Q5R1I1 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav7d-3Q5R1I1 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Trav7d-3Q5R1I1 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav7d-3Q5R1I1 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav7d-3Q5R1I1 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav7d-3Q5R1I1 Gm37856-201ENSMUST00000191634 999 ntBASIC12.31□□□□□ -0.44
Trav7d-3Q5R1I1 Gm43183-201ENSMUST00000200632 547 ntBASIC12.31□□□□□ -0.44
Trav7d-3Q5R1I1 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav7d-3Q5R1I1 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav7d-3Q5R1I1 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav7d-3Q5R1I1 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav7d-3Q5R1I1 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav7d-3Q5R1I1 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav7d-3Q5R1I1 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav7d-3Q5R1I1 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Trav7d-3Q5R1I1 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav7d-3Q5R1I1 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav7d-3Q5R1I1 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC12.31□□□□□ -0.44
Trav7d-3Q5R1I1 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav7d-3Q5R1I1 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav7d-3Q5R1I1 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav7d-3Q5R1I1 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav7d-3Q5R1I1 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav7d-3Q5R1I1 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Trav7d-3Q5R1I1 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav7d-3Q5R1I1 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav7d-3Q5R1I1 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC12.3□□□□□ -0.44
Trav7d-3Q5R1I1 Gm44878-201ENSMUST00000205812 1295 ntBASIC12.3□□□□□ -0.44
Trav7d-3Q5R1I1 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC12.3□□□□□ -0.44
Trav7d-3Q5R1I1 AC135637.1-201ENSMUST00000227750 365 ntBASIC12.3□□□□□ -0.44
Trav7d-3Q5R1I1 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav7d-3Q5R1I1 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Trav7d-3Q5R1I1 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC12.3□□□□□ -0.44
Trav7d-3Q5R1I1 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav7d-3Q5R1I1 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav7d-3Q5R1I1 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav7d-3Q5R1I1 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
Trav7d-3Q5R1I1 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav7d-3Q5R1I1 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav7d-3Q5R1I1 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC12.3□□□□□ -0.44
Trav7d-3Q5R1I1 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav7d-3Q5R1I1 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC12.29□□□□□ -0.44
Trav7d-3Q5R1I1 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Trav7d-3Q5R1I1 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav7d-3Q5R1I1 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav7d-3Q5R1I1 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav7d-3Q5R1I1 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav7d-3Q5R1I1 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav7d-3Q5R1I1 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav7d-3Q5R1I1 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav7d-3Q5R1I1 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC12.29□□□□□ -0.44
Trav7d-3Q5R1I1 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav7d-3Q5R1I1 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC12.29□□□□□ -0.44
Trav7d-3Q5R1I1 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav7d-3Q5R1I1 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav7d-3Q5R1I1 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav7d-3Q5R1I1 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC12.29□□□□□ -0.44
Trav7d-3Q5R1I1 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav7d-3Q5R1I1 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Trav7d-3Q5R1I1 CT010444.2-201ENSMUST00000217877 1629 ntBASIC12.29□□□□□ -0.44
Trav7d-3Q5R1I1 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav7d-3Q5R1I1 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms