Protein–RNA interactions for Protein: Q5R1B6

Trav8d-2, T cell receptor alpha variable 8D-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-2Q5R1B6 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Trav8d-2Q5R1B6 Gm15590-201ENSMUST00000078419 552 ntBASIC16.29■□□□□ 0.2
Trav8d-2Q5R1B6 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav8d-2Q5R1B6 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav8d-2Q5R1B6 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trav8d-2Q5R1B6 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav8d-2Q5R1B6 AC123834.2-201ENSMUST00000224038 2340 ntBASIC16.29■□□□□ 0.2
Trav8d-2Q5R1B6 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav8d-2Q5R1B6 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trav8d-2Q5R1B6 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Trav8d-2Q5R1B6 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Trav8d-2Q5R1B6 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Trav8d-2Q5R1B6 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trav8d-2Q5R1B6 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav8d-2Q5R1B6 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC16.28■□□□□ 0.2
Trav8d-2Q5R1B6 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trav8d-2Q5R1B6 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trav8d-2Q5R1B6 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC16.28■□□□□ 0.2
Trav8d-2Q5R1B6 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC16.28■□□□□ 0.2
Trav8d-2Q5R1B6 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav8d-2Q5R1B6 AV026068-213ENSMUST00000223675 1171 ntBASIC16.28■□□□□ 0.2
Trav8d-2Q5R1B6 AC154621.1-201ENSMUST00000226155 1119 ntBASIC16.28■□□□□ 0.2
Trav8d-2Q5R1B6 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Trav8d-2Q5R1B6 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trav8d-2Q5R1B6 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav8d-2Q5R1B6 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC16.28■□□□□ 0.2
Trav8d-2Q5R1B6 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav8d-2Q5R1B6 Gfra2-202ENSMUST00000227633 1480 ntBASIC16.28■□□□□ 0.2
Trav8d-2Q5R1B6 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Trav8d-2Q5R1B6 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav8d-2Q5R1B6 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Trav8d-2Q5R1B6 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav8d-2Q5R1B6 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Trav8d-2Q5R1B6 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav8d-2Q5R1B6 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Trav8d-2Q5R1B6 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Trav8d-2Q5R1B6 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav8d-2Q5R1B6 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Trav8d-2Q5R1B6 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav8d-2Q5R1B6 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Trav8d-2Q5R1B6 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
Trav8d-2Q5R1B6 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC16.27■□□□□ 0.2
Trav8d-2Q5R1B6 Gm24513-201ENSMUST00000174964 138 ntBASIC16.27■□□□□ 0.2
Trav8d-2Q5R1B6 Gm27397-201ENSMUST00000184997 107 ntBASIC16.27■□□□□ 0.2
Trav8d-2Q5R1B6 Gm43935-201ENSMUST00000203569 1050 ntBASIC16.27■□□□□ 0.2
Trav8d-2Q5R1B6 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Trav8d-2Q5R1B6 AC154757.1-201ENSMUST00000228289 336 ntBASIC16.27■□□□□ 0.2
Trav8d-2Q5R1B6 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav8d-2Q5R1B6 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav8d-2Q5R1B6 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav8d-2Q5R1B6 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav8d-2Q5R1B6 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trav8d-2Q5R1B6 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trav8d-2Q5R1B6 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trav8d-2Q5R1B6 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav8d-2Q5R1B6 Grk6-206ENSMUST00000224995 2971 ntBASIC16.26■□□□□ 0.19
Trav8d-2Q5R1B6 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav8d-2Q5R1B6 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
Trav8d-2Q5R1B6 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trav8d-2Q5R1B6 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav8d-2Q5R1B6 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Trav8d-2Q5R1B6 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Trav8d-2Q5R1B6 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trav8d-2Q5R1B6 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
Trav8d-2Q5R1B6 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav8d-2Q5R1B6 Gm14140-201ENSMUST00000119999 995 ntBASIC16.26■□□□□ 0.19
Trav8d-2Q5R1B6 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav8d-2Q5R1B6 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC16.26■□□□□ 0.19
Trav8d-2Q5R1B6 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav8d-2Q5R1B6 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav8d-2Q5R1B6 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC16.26■□□□□ 0.19
Trav8d-2Q5R1B6 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Trav8d-2Q5R1B6 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC16.26■□□□□ 0.19
Trav8d-2Q5R1B6 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC16.26■□□□□ 0.19
Trav8d-2Q5R1B6 Gm7506-201ENSMUST00000207758 815 ntBASIC16.26■□□□□ 0.19
Trav8d-2Q5R1B6 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC16.26■□□□□ 0.19
Trav8d-2Q5R1B6 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav8d-2Q5R1B6 AC154222.1-201ENSMUST00000223882 475 ntBASIC16.26■□□□□ 0.19
Trav8d-2Q5R1B6 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav8d-2Q5R1B6 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav8d-2Q5R1B6 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav8d-2Q5R1B6 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav8d-2Q5R1B6 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav8d-2Q5R1B6 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trav8d-2Q5R1B6 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav8d-2Q5R1B6 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav8d-2Q5R1B6 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
Trav8d-2Q5R1B6 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trav8d-2Q5R1B6 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trav8d-2Q5R1B6 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav8d-2Q5R1B6 Gm23935-201ENSMUST00000102303 57 ntBASIC16.25■□□□□ 0.19
Trav8d-2Q5R1B6 Gm24270-201ENSMUST00000102326 57 ntBASIC16.25■□□□□ 0.19
Trav8d-2Q5R1B6 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav8d-2Q5R1B6 Gm14494-201ENSMUST00000118786 435 ntBASIC16.25■□□□□ 0.19
Trav8d-2Q5R1B6 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trav8d-2Q5R1B6 Gm24245-201ENSMUST00000157318 57 ntBASIC16.25■□□□□ 0.19
Trav8d-2Q5R1B6 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Trav8d-2Q5R1B6 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav8d-2Q5R1B6 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC16.25■□□□□ 0.19
Trav8d-2Q5R1B6 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms