Protein–RNA interactions for Protein: Q3UV31

Rnf223, RING finger protein 223, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf223Q3UV31 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Rnf223Q3UV31 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Rnf223Q3UV31 Gm10461-201ENSMUST00000202073 4786 ntBASIC16.21■□□□□ 0.19
Rnf223Q3UV31 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rnf223Q3UV31 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Rnf223Q3UV31 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Rnf223Q3UV31 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Rnf223Q3UV31 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rnf223Q3UV31 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
Rnf223Q3UV31 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Rnf223Q3UV31 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rnf223Q3UV31 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC16.21■□□□□ 0.19
Rnf223Q3UV31 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rnf223Q3UV31 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC16.21■□□□□ 0.19
Rnf223Q3UV31 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Rnf223Q3UV31 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rnf223Q3UV31 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rnf223Q3UV31 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Rnf223Q3UV31 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Rnf223Q3UV31 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rnf223Q3UV31 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Rnf223Q3UV31 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC16.2■□□□□ 0.18
Rnf223Q3UV31 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rnf223Q3UV31 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rnf223Q3UV31 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rnf223Q3UV31 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rnf223Q3UV31 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC16.2■□□□□ 0.18
Rnf223Q3UV31 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Rnf223Q3UV31 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC16.2■□□□□ 0.18
Rnf223Q3UV31 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Rnf223Q3UV31 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rnf223Q3UV31 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Rnf223Q3UV31 Gm6598-201ENSMUST00000202719 2615 ntBASIC16.2■□□□□ 0.18
Rnf223Q3UV31 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Rnf223Q3UV31 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC16.2■□□□□ 0.18
Rnf223Q3UV31 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Rnf223Q3UV31 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rnf223Q3UV31 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC16.19■□□□□ 0.18
Rnf223Q3UV31 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rnf223Q3UV31 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rnf223Q3UV31 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rnf223Q3UV31 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC16.19■□□□□ 0.18
Rnf223Q3UV31 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Rnf223Q3UV31 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rnf223Q3UV31 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Rnf223Q3UV31 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC16.19■□□□□ 0.18
Rnf223Q3UV31 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Rnf223Q3UV31 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rnf223Q3UV31 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rnf223Q3UV31 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC16.19■□□□□ 0.18
Rnf223Q3UV31 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC16.19■□□□□ 0.18
Rnf223Q3UV31 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rnf223Q3UV31 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
Rnf223Q3UV31 AC159205.3-201ENSMUST00000224614 874 ntBASIC16.19■□□□□ 0.18
Rnf223Q3UV31 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rnf223Q3UV31 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC16.19■□□□□ 0.18
Rnf223Q3UV31 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Rnf223Q3UV31 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rnf223Q3UV31 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rnf223Q3UV31 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Rnf223Q3UV31 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Rnf223Q3UV31 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC16.18■□□□□ 0.18
Rnf223Q3UV31 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rnf223Q3UV31 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC16.18■□□□□ 0.18
Rnf223Q3UV31 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rnf223Q3UV31 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC16.18■□□□□ 0.18
Rnf223Q3UV31 Gm43294-201ENSMUST00000202850 2490 ntBASIC16.18■□□□□ 0.18
Rnf223Q3UV31 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC16.18■□□□□ 0.18
Rnf223Q3UV31 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Rnf223Q3UV31 AC125350.1-201ENSMUST00000225115 903 ntBASIC16.18■□□□□ 0.18
Rnf223Q3UV31 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Rnf223Q3UV31 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rnf223Q3UV31 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rnf223Q3UV31 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rnf223Q3UV31 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rnf223Q3UV31 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rnf223Q3UV31 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rnf223Q3UV31 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rnf223Q3UV31 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Rnf223Q3UV31 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Rnf223Q3UV31 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rnf223Q3UV31 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rnf223Q3UV31 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rnf223Q3UV31 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC16.17■□□□□ 0.18
Rnf223Q3UV31 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rnf223Q3UV31 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
Rnf223Q3UV31 Gm17971-201ENSMUST00000190239 806 ntBASIC16.17■□□□□ 0.18
Rnf223Q3UV31 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC16.17■□□□□ 0.18
Rnf223Q3UV31 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rnf223Q3UV31 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Rnf223Q3UV31 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Rnf223Q3UV31 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rnf223Q3UV31 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Rnf223Q3UV31 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Rnf223Q3UV31 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rnf223Q3UV31 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Rnf223Q3UV31 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Rnf223Q3UV31 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Rnf223Q3UV31 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Rnf223Q3UV31 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms