Protein–RNA interactions for Protein: Q3UU56

Gm29609, Predicted gene 29609, mousemouse

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm29609Q3UU56 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm29609Q3UU56 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm29609Q3UU56 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.53■□□□□ 0.4
Gm29609Q3UU56 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gm29609Q3UU56 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gm29609Q3UU56 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gm29609Q3UU56 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Gm29609Q3UU56 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gm29609Q3UU56 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gm29609Q3UU56 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gm29609Q3UU56 Gm45774-201ENSMUST00000211992 2665 ntBASIC17.53■□□□□ 0.4
Gm29609Q3UU56 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Gm29609Q3UU56 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC17.53■□□□□ 0.4
Gm29609Q3UU56 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC17.53■□□□□ 0.4
Gm29609Q3UU56 Gm18733-201ENSMUST00000173950 856 ntBASIC17.53■□□□□ 0.4
Gm29609Q3UU56 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Gm29609Q3UU56 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC17.53■□□□□ 0.4
Gm29609Q3UU56 Gm4974-201ENSMUST00000209974 875 ntBASIC17.53■□□□□ 0.4
Gm29609Q3UU56 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Gm29609Q3UU56 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gm29609Q3UU56 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Gm29609Q3UU56 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Gm29609Q3UU56 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Gm29609Q3UU56 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.53■□□□□ 0.4
Gm29609Q3UU56 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gm29609Q3UU56 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Gm29609Q3UU56 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Gm29609Q3UU56 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Gm29609Q3UU56 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Gm29609Q3UU56 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Gm29609Q3UU56 Gm16061-201ENSMUST00000122167 857 ntBASIC17.52■□□□□ 0.4
Gm29609Q3UU56 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Gm29609Q3UU56 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC17.52■□□□□ 0.4
Gm29609Q3UU56 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Gm29609Q3UU56 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Gm29609Q3UU56 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.52■□□□□ 0.39
Gm29609Q3UU56 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Gm29609Q3UU56 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Gm29609Q3UU56 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
Gm29609Q3UU56 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Gm29609Q3UU56 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Gm29609Q3UU56 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gm29609Q3UU56 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gm29609Q3UU56 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gm29609Q3UU56 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gm29609Q3UU56 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Gm29609Q3UU56 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Gm29609Q3UU56 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gm29609Q3UU56 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gm29609Q3UU56 Gm13884-201ENSMUST00000118103 829 ntBASIC17.51■□□□□ 0.39
Gm29609Q3UU56 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Gm29609Q3UU56 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC17.51■□□□□ 0.39
Gm29609Q3UU56 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Gm29609Q3UU56 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC17.51■□□□□ 0.39
Gm29609Q3UU56 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gm29609Q3UU56 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gm29609Q3UU56 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gm29609Q3UU56 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Gm29609Q3UU56 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gm29609Q3UU56 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gm29609Q3UU56 Tfap2a-209ENSMUST00000225180 1828 ntBASIC17.51■□□□□ 0.39
Gm29609Q3UU56 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gm29609Q3UU56 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gm29609Q3UU56 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC17.51■□□□□ 0.39
Gm29609Q3UU56 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gm29609Q3UU56 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gm29609Q3UU56 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Gm29609Q3UU56 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gm29609Q3UU56 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Gm29609Q3UU56 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm29609Q3UU56 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm29609Q3UU56 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm29609Q3UU56 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Gm29609Q3UU56 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm29609Q3UU56 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Gm29609Q3UU56 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm29609Q3UU56 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC17.5■□□□□ 0.39
Gm29609Q3UU56 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Gm29609Q3UU56 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC17.5■□□□□ 0.39
Gm29609Q3UU56 Gm34391-201ENSMUST00000203706 907 ntBASIC17.5■□□□□ 0.39
Gm29609Q3UU56 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Gm29609Q3UU56 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm29609Q3UU56 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm29609Q3UU56 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm29609Q3UU56 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm29609Q3UU56 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Gm29609Q3UU56 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm29609Q3UU56 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm29609Q3UU56 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm29609Q3UU56 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Gm29609Q3UU56 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Gm29609Q3UU56 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gm29609Q3UU56 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gm29609Q3UU56 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Gm29609Q3UU56 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gm29609Q3UU56 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gm29609Q3UU56 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gm29609Q3UU56 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gm29609Q3UU56 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC17.49■□□□□ 0.39
Gm29609Q3UU56 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms