Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim63Q38HM4 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim63Q38HM4 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trim63Q38HM4 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim63Q38HM4 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim63Q38HM4 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trim63Q38HM4 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim63Q38HM4 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim63Q38HM4 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
Trim63Q38HM4 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim63Q38HM4 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim63Q38HM4 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim63Q38HM4 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim63Q38HM4 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trim63Q38HM4 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim63Q38HM4 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim63Q38HM4 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC13.88□□□□□ -0.19
Trim63Q38HM4 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC13.88□□□□□ -0.19
Trim63Q38HM4 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim63Q38HM4 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim63Q38HM4 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trim63Q38HM4 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim63Q38HM4 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC13.88□□□□□ -0.19
Trim63Q38HM4 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim63Q38HM4 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim63Q38HM4 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Trim63Q38HM4 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trim63Q38HM4 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC13.87□□□□□ -0.19
Trim63Q38HM4 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim63Q38HM4 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trim63Q38HM4 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Trim63Q38HM4 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim63Q38HM4 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Trim63Q38HM4 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC13.87□□□□□ -0.19
Trim63Q38HM4 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim63Q38HM4 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trim63Q38HM4 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC13.87□□□□□ -0.19
Trim63Q38HM4 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC13.87□□□□□ -0.19
Trim63Q38HM4 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trim63Q38HM4 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC13.87□□□□□ -0.19
Trim63Q38HM4 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC13.87□□□□□ -0.19
Trim63Q38HM4 Gm37437-201ENSMUST00000194451 1937 ntBASIC13.87□□□□□ -0.19
Trim63Q38HM4 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim63Q38HM4 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim63Q38HM4 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim63Q38HM4 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim63Q38HM4 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC13.87□□□□□ -0.19
Trim63Q38HM4 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim63Q38HM4 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Trim63Q38HM4 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Trim63Q38HM4 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim63Q38HM4 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim63Q38HM4 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trim63Q38HM4 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim63Q38HM4 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim63Q38HM4 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim63Q38HM4 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim63Q38HM4 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim63Q38HM4 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Trim63Q38HM4 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC13.86□□□□□ -0.19
Trim63Q38HM4 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim63Q38HM4 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim63Q38HM4 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC13.86□□□□□ -0.19
Trim63Q38HM4 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim63Q38HM4 Gm10420-201ENSMUST00000121713 882 ntBASIC13.86□□□□□ -0.19
Trim63Q38HM4 Gm10657-201ENSMUST00000193528 1031 ntBASIC13.86□□□□□ -0.19
Trim63Q38HM4 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trim63Q38HM4 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim63Q38HM4 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Trim63Q38HM4 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Trim63Q38HM4 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trim63Q38HM4 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Trim63Q38HM4 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim63Q38HM4 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trim63Q38HM4 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Trim63Q38HM4 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim63Q38HM4 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim63Q38HM4 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim63Q38HM4 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim63Q38HM4 AC154412.1-201ENSMUST00000226540 2786 ntBASIC13.86□□□□□ -0.19
Trim63Q38HM4 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Trim63Q38HM4 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim63Q38HM4 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim63Q38HM4 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim63Q38HM4 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trim63Q38HM4 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim63Q38HM4 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trim63Q38HM4 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim63Q38HM4 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim63Q38HM4 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC13.85□□□□□ -0.19
Trim63Q38HM4 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim63Q38HM4 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim63Q38HM4 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim63Q38HM4 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim63Q38HM4 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trim63Q38HM4 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Trim63Q38HM4 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trim63Q38HM4 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trim63Q38HM4 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trim63Q38HM4 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms