Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC8.92□□□□□ -0.98
Ush2AQ2QI47 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC8.92□□□□□ -0.98
Ush2AQ2QI47 Mir1247-201ENSMUST00000116706 82 ntBASIC8.92□□□□□ -0.98
Ush2AQ2QI47 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Ush2AQ2QI47 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Ush2AQ2QI47 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Ush2AQ2QI47 Gm43125-201ENSMUST00000201724 730 ntBASIC8.92□□□□□ -0.98
Ush2AQ2QI47 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Ush2AQ2QI47 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Ush2AQ2QI47 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC8.92□□□□□ -0.98
Ush2AQ2QI47 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Ush2AQ2QI47 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Ush2AQ2QI47 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Ush2AQ2QI47 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Ush2AQ2QI47 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Ush2AQ2QI47 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
Ush2AQ2QI47 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC8.91□□□□□ -0.98
Ush2AQ2QI47 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Ush2AQ2QI47 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC8.91□□□□□ -0.98
Ush2AQ2QI47 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Ush2AQ2QI47 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Ush2AQ2QI47 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC8.91□□□□□ -0.98
Ush2AQ2QI47 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Ush2AQ2QI47 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Ush2AQ2QI47 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC8.91□□□□□ -0.98
Ush2AQ2QI47 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
Ush2AQ2QI47 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Ush2AQ2QI47 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC8.91□□□□□ -0.98
Ush2AQ2QI47 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
Ush2AQ2QI47 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC8.91□□□□□ -0.98
Ush2AQ2QI47 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC8.91□□□□□ -0.98
Ush2AQ2QI47 Gm23984-201ENSMUST00000157139 203 ntBASIC8.91□□□□□ -0.98
Ush2AQ2QI47 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC8.91□□□□□ -0.98
Ush2AQ2QI47 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Ush2AQ2QI47 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Ush2AQ2QI47 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Ush2AQ2QI47 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Ush2AQ2QI47 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Ush2AQ2QI47 Syt7-205ENSMUST00000224135 1557 ntBASIC8.91□□□□□ -0.98
Ush2AQ2QI47 Gm15427-201ENSMUST00000117288 531 ntBASIC8.91□□□□□ -0.98
Ush2AQ2QI47 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC8.91□□□□□ -0.98
Ush2AQ2QI47 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Ush2AQ2QI47 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Ush2AQ2QI47 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Ush2AQ2QI47 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Ush2AQ2QI47 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC8.9□□□□□ -0.98
Ush2AQ2QI47 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Ush2AQ2QI47 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Ush2AQ2QI47 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Ush2AQ2QI47 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC8.9□□□□□ -0.98
Ush2AQ2QI47 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC8.9□□□□□ -0.98
Ush2AQ2QI47 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC8.9□□□□□ -0.98
Ush2AQ2QI47 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Ush2AQ2QI47 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Ush2AQ2QI47 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Ush2AQ2QI47 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Ush2AQ2QI47 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Ush2AQ2QI47 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC8.9□□□□□ -0.98
Ush2AQ2QI47 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Ush2AQ2QI47 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Ush2AQ2QI47 Gm3786-201ENSMUST00000202659 378 ntBASIC8.9□□□□□ -0.98
Ush2AQ2QI47 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.98
Ush2AQ2QI47 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Ush2AQ2QI47 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Ush2AQ2QI47 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC8.9□□□□□ -0.98
Ush2AQ2QI47 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Ush2AQ2QI47 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.98
Ush2AQ2QI47 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.98
Ush2AQ2QI47 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC8.9□□□□□ -0.98
Ush2AQ2QI47 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.98
Ush2AQ2QI47 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC8.9□□□□□ -0.98
Ush2AQ2QI47 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.98
Ush2AQ2QI47 Gm7336-201ENSMUST00000107041 1232 ntBASIC8.9□□□□□ -0.98
Ush2AQ2QI47 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Ush2AQ2QI47 Gm20553-201ENSMUST00000204205 844 ntBASIC8.9□□□□□ -0.98
Ush2AQ2QI47 Gm7730-201ENSMUST00000212486 454 ntBASIC8.9□□□□□ -0.98
Ush2AQ2QI47 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Ush2AQ2QI47 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Ush2AQ2QI47 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
Ush2AQ2QI47 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
Ush2AQ2QI47 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
Ush2AQ2QI47 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC8.9□□□□□ -0.99
Ush2AQ2QI47 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
Ush2AQ2QI47 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC8.9□□□□□ -0.99
Ush2AQ2QI47 Gm5779-201ENSMUST00000218467 910 ntBASIC8.9□□□□□ -0.99
Ush2AQ2QI47 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
Ush2AQ2QI47 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
Ush2AQ2QI47 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC8.9□□□□□ -0.99
Ush2AQ2QI47 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
Ush2AQ2QI47 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
Ush2AQ2QI47 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Ush2AQ2QI47 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
Ush2AQ2QI47 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC8.89□□□□□ -0.99
Ush2AQ2QI47 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC8.89□□□□□ -0.99
Ush2AQ2QI47 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC8.89□□□□□ -0.99
Ush2AQ2QI47 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
Ush2AQ2QI47 Gm44855-201ENSMUST00000205725 362 ntBASIC8.89□□□□□ -0.99
Ush2AQ2QI47 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Ush2AQ2QI47 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC8.89□□□□□ -0.99
Ush2AQ2QI47 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC8.89□□□□□ -0.99
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms