Protein–RNA interactions for Protein: Q07424

Cdx4, Homeobox protein CDX-4, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx4Q07424 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC12.96□□□□□ -0.34
Cdx4Q07424 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Cdx4Q07424 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Cdx4Q07424 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cdx4Q07424 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cdx4Q07424 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cdx4Q07424 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cdx4Q07424 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cdx4Q07424 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cdx4Q07424 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cdx4Q07424 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC12.95□□□□□ -0.34
Cdx4Q07424 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Cdx4Q07424 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC12.95□□□□□ -0.34
Cdx4Q07424 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC12.95□□□□□ -0.34
Cdx4Q07424 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cdx4Q07424 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cdx4Q07424 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cdx4Q07424 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cdx4Q07424 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Cdx4Q07424 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cdx4Q07424 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cdx4Q07424 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Cdx4Q07424 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Cdx4Q07424 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cdx4Q07424 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cdx4Q07424 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cdx4Q07424 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cdx4Q07424 Gm7292-201ENSMUST00000194706 2527 ntBASIC12.95□□□□□ -0.34
Cdx4Q07424 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC12.95□□□□□ -0.34
Cdx4Q07424 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cdx4Q07424 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cdx4Q07424 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdx4Q07424 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdx4Q07424 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cdx4Q07424 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdx4Q07424 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdx4Q07424 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdx4Q07424 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdx4Q07424 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdx4Q07424 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cdx4Q07424 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Cdx4Q07424 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdx4Q07424 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Cdx4Q07424 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cdx4Q07424 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cdx4Q07424 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Cdx4Q07424 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC12.94□□□□□ -0.34
Cdx4Q07424 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Cdx4Q07424 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC12.94□□□□□ -0.34
Cdx4Q07424 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdx4Q07424 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Cdx4Q07424 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Cdx4Q07424 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdx4Q07424 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdx4Q07424 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdx4Q07424 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdx4Q07424 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdx4Q07424 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdx4Q07424 Gm37820-201ENSMUST00000194021 2147 ntBASIC12.94□□□□□ -0.34
Cdx4Q07424 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cdx4Q07424 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdx4Q07424 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdx4Q07424 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdx4Q07424 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdx4Q07424 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC12.93□□□□□ -0.34
Cdx4Q07424 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdx4Q07424 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Cdx4Q07424 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdx4Q07424 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cdx4Q07424 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdx4Q07424 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Cdx4Q07424 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Cdx4Q07424 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdx4Q07424 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdx4Q07424 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC12.93□□□□□ -0.34
Cdx4Q07424 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC12.93□□□□□ -0.34
Cdx4Q07424 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdx4Q07424 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Cdx4Q07424 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC12.93□□□□□ -0.34
Cdx4Q07424 Gm12085-201ENSMUST00000119263 940 ntBASIC12.93□□□□□ -0.34
Cdx4Q07424 Gm11539-201ENSMUST00000119837 557 ntBASIC12.93□□□□□ -0.34
Cdx4Q07424 Gm13436-201ENSMUST00000120418 567 ntBASIC12.93□□□□□ -0.34
Cdx4Q07424 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cdx4Q07424 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cdx4Q07424 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC12.93□□□□□ -0.34
Cdx4Q07424 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdx4Q07424 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdx4Q07424 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdx4Q07424 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdx4Q07424 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdx4Q07424 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdx4Q07424 Gm8668-201ENSMUST00000120559 1447 ntBASIC12.93□□□□□ -0.34
Cdx4Q07424 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdx4Q07424 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdx4Q07424 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC12.93□□□□□ -0.34
Cdx4Q07424 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cdx4Q07424 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC12.93□□□□□ -0.34
Cdx4Q07424 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdx4Q07424 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdx4Q07424 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms