Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Nkx2-3P97334 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Nkx2-3P97334 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC21.04■□□□□ 0.96
Nkx2-3P97334 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
Nkx2-3P97334 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC21.04■□□□□ 0.96
Nkx2-3P97334 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Nkx2-3P97334 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Nkx2-3P97334 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Nkx2-3P97334 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Nkx2-3P97334 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Nkx2-3P97334 Gm5712-201ENSMUST00000199748 1043 ntBASIC21.04■□□□□ 0.96
Nkx2-3P97334 Gm7506-201ENSMUST00000207758 815 ntBASIC21.04■□□□□ 0.96
Nkx2-3P97334 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Nkx2-3P97334 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Nkx2-3P97334 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Nkx2-3P97334 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC21.04■□□□□ 0.96
Nkx2-3P97334 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Nkx2-3P97334 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Nkx2-3P97334 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Nkx2-3P97334 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Nkx2-3P97334 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Nkx2-3P97334 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Nkx2-3P97334 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Nkx2-3P97334 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
Nkx2-3P97334 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Nkx2-3P97334 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Nkx2-3P97334 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
Nkx2-3P97334 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Nkx2-3P97334 Gm13830-205ENSMUST00000201195 1155 ntBASIC21.03■□□□□ 0.96
Nkx2-3P97334 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC21.03■□□□□ 0.96
Nkx2-3P97334 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Nkx2-3P97334 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Nkx2-3P97334 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Nkx2-3P97334 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Nkx2-3P97334 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Nkx2-3P97334 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Nkx2-3P97334 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Nkx2-3P97334 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Nkx2-3P97334 Gm37811-201ENSMUST00000192416 2601 ntBASIC21.03■□□□□ 0.96
Nkx2-3P97334 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Nkx2-3P97334 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Nkx2-3P97334 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Nkx2-3P97334 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Nkx2-3P97334 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Nkx2-3P97334 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Nkx2-3P97334 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Nkx2-3P97334 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC21.02■□□□□ 0.96
Nkx2-3P97334 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC21.02■□□□□ 0.96
Nkx2-3P97334 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Nkx2-3P97334 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Nkx2-3P97334 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Nkx2-3P97334 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Nkx2-3P97334 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Nkx2-3P97334 Gm32996-201ENSMUST00000199828 1447 ntBASIC21.02■□□□□ 0.96
Nkx2-3P97334 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC21.02■□□□□ 0.95
Nkx2-3P97334 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Nkx2-3P97334 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Nkx2-3P97334 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Nkx2-3P97334 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC21.01■□□□□ 0.95
Nkx2-3P97334 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Nkx2-3P97334 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Nkx2-3P97334 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Nkx2-3P97334 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Nkx2-3P97334 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Nkx2-3P97334 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Nkx2-3P97334 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC21.01■□□□□ 0.95
Nkx2-3P97334 Gm12350-201ENSMUST00000121208 462 ntBASIC21.01■□□□□ 0.95
Nkx2-3P97334 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC21.01■□□□□ 0.95
Nkx2-3P97334 Gm25745-201ENSMUST00000174945 133 ntBASIC21.01■□□□□ 0.95
Nkx2-3P97334 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC21.01■□□□□ 0.95
Nkx2-3P97334 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Nkx2-3P97334 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Nkx2-3P97334 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Nkx2-3P97334 Gm5867-201ENSMUST00000063197 592 ntBASIC21.01■□□□□ 0.95
Nkx2-3P97334 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Nkx2-3P97334 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Nkx2-3P97334 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Nkx2-3P97334 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Nkx2-3P97334 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Nkx2-3P97334 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Nkx2-3P97334 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC21■□□□□ 0.95
Nkx2-3P97334 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Nkx2-3P97334 Vti1a-206ENSMUST00000225529 1244 ntBASIC21■□□□□ 0.95
Nkx2-3P97334 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC21■□□□□ 0.95
Nkx2-3P97334 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Nkx2-3P97334 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Nkx2-3P97334 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Nkx2-3P97334 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Nkx2-3P97334 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC20.99■□□□□ 0.95
Nkx2-3P97334 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Nkx2-3P97334 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Nkx2-3P97334 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC20.99■□□□□ 0.95
Nkx2-3P97334 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Nkx2-3P97334 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Nkx2-3P97334 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC20.99■□□□□ 0.95
Nkx2-3P97334 Gm1401-201ENSMUST00000122048 772 ntBASIC20.99■□□□□ 0.95
Nkx2-3P97334 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC20.99■□□□□ 0.95
Nkx2-3P97334 Gm18206-201ENSMUST00000207027 926 ntBASIC20.99■□□□□ 0.95
Nkx2-3P97334 Gm18195-201ENSMUST00000207604 706 ntBASIC20.99■□□□□ 0.95
Nkx2-3P97334 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms