Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Trim43cP86449 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
Trim43cP86449 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim43cP86449 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Trim43cP86449 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim43cP86449 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim43cP86449 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim43cP86449 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Trim43cP86449 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim43cP86449 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim43cP86449 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC18.18■□□□□ 0.5
Trim43cP86449 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim43cP86449 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim43cP86449 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim43cP86449 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
Trim43cP86449 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Trim43cP86449 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim43cP86449 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Trim43cP86449 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim43cP86449 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC18.18■□□□□ 0.5
Trim43cP86449 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim43cP86449 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim43cP86449 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC18.17■□□□□ 0.5
Trim43cP86449 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Trim43cP86449 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim43cP86449 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim43cP86449 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim43cP86449 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Trim43cP86449 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC18.17■□□□□ 0.5
Trim43cP86449 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Trim43cP86449 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC18.17■□□□□ 0.5
Trim43cP86449 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim43cP86449 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim43cP86449 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim43cP86449 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim43cP86449 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim43cP86449 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Trim43cP86449 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Trim43cP86449 Gm15743-202ENSMUST00000182690 1901 ntBASIC18.17■□□□□ 0.5
Trim43cP86449 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim43cP86449 Gm5421-201ENSMUST00000181698 2354 ntBASIC18.17■□□□□ 0.5
Trim43cP86449 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim43cP86449 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim43cP86449 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Trim43cP86449 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim43cP86449 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Trim43cP86449 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim43cP86449 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim43cP86449 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
Trim43cP86449 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Trim43cP86449 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Trim43cP86449 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Trim43cP86449 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Trim43cP86449 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Trim43cP86449 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Trim43cP86449 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Trim43cP86449 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim43cP86449 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Trim43cP86449 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim43cP86449 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Trim43cP86449 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC18.16■□□□□ 0.5
Trim43cP86449 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim43cP86449 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim43cP86449 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim43cP86449 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim43cP86449 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC18.15■□□□□ 0.5
Trim43cP86449 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim43cP86449 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
Trim43cP86449 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
Trim43cP86449 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Trim43cP86449 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trim43cP86449 Gm26039-201ENSMUST00000158152 144 ntBASIC18.15■□□□□ 0.5
Trim43cP86449 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC18.15■□□□□ 0.5
Trim43cP86449 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim43cP86449 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC18.15■□□□□ 0.5
Trim43cP86449 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trim43cP86449 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim43cP86449 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim43cP86449 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.5
Trim43cP86449 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Trim43cP86449 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Trim43cP86449 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim43cP86449 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Trim43cP86449 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim43cP86449 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim43cP86449 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
Trim43cP86449 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim43cP86449 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC18.14■□□□□ 0.49
Trim43cP86449 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim43cP86449 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC18.14■□□□□ 0.49
Trim43cP86449 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim43cP86449 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim43cP86449 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim43cP86449 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC18.14■□□□□ 0.49
Trim43cP86449 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim43cP86449 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim43cP86449 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim43cP86449 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim43cP86449 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim43cP86449 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms