Protein–RNA interactions for Protein: P82976

Gbx1, Homeobox protein GBX-1, mousemouse

Predictions only

Length 418 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gbx1P82976 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Gbx1P82976 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Gbx1P82976 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Gbx1P82976 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Gbx1P82976 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Gbx1P82976 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Gbx1P82976 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Gbx1P82976 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC15.7■□□□□ 0.1
Gbx1P82976 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Gbx1P82976 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Gbx1P82976 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Gbx1P82976 Gm7791-201ENSMUST00000219066 539 ntBASIC15.7■□□□□ 0.1
Gbx1P82976 Timm23-208ENSMUST00000226683 750 ntBASIC15.7■□□□□ 0.1
Gbx1P82976 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Gbx1P82976 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Gbx1P82976 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Gbx1P82976 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
Gbx1P82976 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC15.7■□□□□ 0.1
Gbx1P82976 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Gbx1P82976 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Gbx1P82976 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Gbx1P82976 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Gbx1P82976 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC15.69■□□□□ 0.1
Gbx1P82976 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Gbx1P82976 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Gbx1P82976 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Gbx1P82976 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Gbx1P82976 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Gbx1P82976 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Gbx1P82976 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Gbx1P82976 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC15.69■□□□□ 0.1
Gbx1P82976 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Gbx1P82976 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Gbx1P82976 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Gbx1P82976 Gm13181-201ENSMUST00000120117 1069 ntBASIC15.69■□□□□ 0.1
Gbx1P82976 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Gbx1P82976 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC15.69■□□□□ 0.1
Gbx1P82976 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Gbx1P82976 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
Gbx1P82976 Gm8520-201ENSMUST00000186517 868 ntBASIC15.69■□□□□ 0.1
Gbx1P82976 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Gbx1P82976 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Gbx1P82976 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Gbx1P82976 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Gbx1P82976 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Gbx1P82976 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Gbx1P82976 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Gbx1P82976 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Gbx1P82976 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Gbx1P82976 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Gbx1P82976 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Gbx1P82976 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Gbx1P82976 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Gbx1P82976 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Gbx1P82976 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC15.68■□□□□ 0.1
Gbx1P82976 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Gbx1P82976 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Gbx1P82976 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Gbx1P82976 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Gbx1P82976 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Gbx1P82976 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Gbx1P82976 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Gbx1P82976 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Gbx1P82976 Gm715-201ENSMUST00000117865 831 ntBASIC15.68■□□□□ 0.1
Gbx1P82976 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC15.68■□□□□ 0.1
Gbx1P82976 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Gbx1P82976 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC15.68■□□□□ 0.1
Gbx1P82976 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC15.68■□□□□ 0.1
Gbx1P82976 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Gbx1P82976 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Gbx1P82976 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Gbx1P82976 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Gbx1P82976 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Gbx1P82976 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Gbx1P82976 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Gbx1P82976 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Gbx1P82976 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Gbx1P82976 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Gbx1P82976 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Gbx1P82976 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Gbx1P82976 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Gbx1P82976 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Gbx1P82976 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Gbx1P82976 AC069562.2-201ENSMUST00000224644 2146 ntBASIC15.67■□□□□ 0.1
Gbx1P82976 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Gbx1P82976 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Gbx1P82976 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Gbx1P82976 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Gbx1P82976 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC15.67■□□□□ 0.1
Gbx1P82976 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC15.67■□□□□ 0.1
Gbx1P82976 Gm3375-201ENSMUST00000203929 796 ntBASIC15.67■□□□□ 0.1
Gbx1P82976 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Gbx1P82976 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Gbx1P82976 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Gbx1P82976 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Gbx1P82976 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Gbx1P82976 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Gbx1P82976 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Gbx1P82976 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Gbx1P82976 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms