Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Sssca1P56873 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Sssca1P56873 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Sssca1P56873 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Sssca1P56873 Gm3807-201ENSMUST00000193520 1168 ntBASIC13.55□□□□□ -0.24
Sssca1P56873 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC13.55□□□□□ -0.24
Sssca1P56873 AC163280.1-201ENSMUST00000228194 1100 ntBASIC13.55□□□□□ -0.24
Sssca1P56873 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sssca1P56873 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sssca1P56873 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sssca1P56873 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Sssca1P56873 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sssca1P56873 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Sssca1P56873 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sssca1P56873 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sssca1P56873 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Sssca1P56873 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sssca1P56873 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Sssca1P56873 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sssca1P56873 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sssca1P56873 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Sssca1P56873 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Sssca1P56873 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sssca1P56873 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sssca1P56873 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Sssca1P56873 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sssca1P56873 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sssca1P56873 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sssca1P56873 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC13.54□□□□□ -0.24
Sssca1P56873 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC13.54□□□□□ -0.24
Sssca1P56873 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Sssca1P56873 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sssca1P56873 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sssca1P56873 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sssca1P56873 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sssca1P56873 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Sssca1P56873 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sssca1P56873 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Sssca1P56873 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sssca1P56873 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Sssca1P56873 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Sssca1P56873 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sssca1P56873 Gm12896-201ENSMUST00000118430 226 ntBASIC13.54□□□□□ -0.24
Sssca1P56873 Gm12933-201ENSMUST00000120203 872 ntBASIC13.54□□□□□ -0.24
Sssca1P56873 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Sssca1P56873 Gm4974-201ENSMUST00000209974 875 ntBASIC13.54□□□□□ -0.24
Sssca1P56873 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC13.54□□□□□ -0.24
Sssca1P56873 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sssca1P56873 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
Sssca1P56873 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sssca1P56873 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sssca1P56873 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sssca1P56873 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sssca1P56873 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Sssca1P56873 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Sssca1P56873 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sssca1P56873 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC13.54□□□□□ -0.24
Sssca1P56873 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sssca1P56873 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Sssca1P56873 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sssca1P56873 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Sssca1P56873 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sssca1P56873 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Sssca1P56873 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sssca1P56873 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Sssca1P56873 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sssca1P56873 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sssca1P56873 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sssca1P56873 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Sssca1P56873 Gm8495-201ENSMUST00000188740 694 ntBASIC13.53□□□□□ -0.24
Sssca1P56873 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sssca1P56873 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sssca1P56873 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sssca1P56873 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
Sssca1P56873 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sssca1P56873 Gm43859-201ENSMUST00000200075 1412 ntBASIC13.53□□□□□ -0.24
Sssca1P56873 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sssca1P56873 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Sssca1P56873 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Sssca1P56873 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sssca1P56873 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sssca1P56873 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC13.53□□□□□ -0.24
Sssca1P56873 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sssca1P56873 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sssca1P56873 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Sssca1P56873 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Sssca1P56873 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Sssca1P56873 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Sssca1P56873 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC13.52□□□□□ -0.24
Sssca1P56873 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Sssca1P56873 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Sssca1P56873 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Sssca1P56873 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Sssca1P56873 Ptprs-211ENSMUST00000223859 5588 ntBASIC13.52□□□□□ -0.24
Sssca1P56873 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Sssca1P56873 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Sssca1P56873 Gm11249-201ENSMUST00000117071 859 ntBASIC13.52□□□□□ -0.25
Sssca1P56873 Gm13158-201ENSMUST00000122007 736 ntBASIC13.52□□□□□ -0.25
Sssca1P56873 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC13.52□□□□□ -0.25
Sssca1P56873 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC13.52□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms