Protein–RNA interactions for Protein: P55271

Cdkn2b, Cyclin-dependent kinase 4 inhibitor B, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn2bP55271 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cdkn2bP55271 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Cdkn2bP55271 Gm45203-201ENSMUST00000206384 1831 ntBASIC16.03■□□□□ 0.16
Cdkn2bP55271 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Cdkn2bP55271 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cdkn2bP55271 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cdkn2bP55271 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cdkn2bP55271 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cdkn2bP55271 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
Cdkn2bP55271 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC16.03■□□□□ 0.16
Cdkn2bP55271 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC16.03■□□□□ 0.16
Cdkn2bP55271 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Cdkn2bP55271 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cdkn2bP55271 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cdkn2bP55271 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cdkn2bP55271 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cdkn2bP55271 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cdkn2bP55271 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cdkn2bP55271 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Cdkn2bP55271 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Cdkn2bP55271 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cdkn2bP55271 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cdkn2bP55271 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cdkn2bP55271 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cdkn2bP55271 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cdkn2bP55271 Gm43072-201ENSMUST00000200283 1671 ntBASIC16.02■□□□□ 0.16
Cdkn2bP55271 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC16.02■□□□□ 0.16
Cdkn2bP55271 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Cdkn2bP55271 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC16.02■□□□□ 0.16
Cdkn2bP55271 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Cdkn2bP55271 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.16
Cdkn2bP55271 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC16.02■□□□□ 0.16
Cdkn2bP55271 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Cdkn2bP55271 Gm12527-201ENSMUST00000117967 564 ntBASIC16.02■□□□□ 0.16
Cdkn2bP55271 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC16.02■□□□□ 0.16
Cdkn2bP55271 Il3ra-202ENSMUST00000223589 738 ntBASIC16.02■□□□□ 0.16
Cdkn2bP55271 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Cdkn2bP55271 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Cdkn2bP55271 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Cdkn2bP55271 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Cdkn2bP55271 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Cdkn2bP55271 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Cdkn2bP55271 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cdkn2bP55271 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC16.01■□□□□ 0.15
Cdkn2bP55271 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cdkn2bP55271 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cdkn2bP55271 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cdkn2bP55271 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cdkn2bP55271 AC115863.1-201ENSMUST00000214815 1813 ntBASIC16.01■□□□□ 0.15
Cdkn2bP55271 CT010478.1-201ENSMUST00000220747 2787 ntBASIC16.01■□□□□ 0.15
Cdkn2bP55271 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Cdkn2bP55271 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cdkn2bP55271 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cdkn2bP55271 Gm5643-201ENSMUST00000117081 966 ntBASIC16.01■□□□□ 0.15
Cdkn2bP55271 Gm7638-201ENSMUST00000121348 967 ntBASIC16.01■□□□□ 0.15
Cdkn2bP55271 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC16.01■□□□□ 0.15
Cdkn2bP55271 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cdkn2bP55271 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cdkn2bP55271 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cdkn2bP55271 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cdkn2bP55271 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cdkn2bP55271 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cdkn2bP55271 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cdkn2bP55271 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC16.01■□□□□ 0.15
Cdkn2bP55271 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC16.01■□□□□ 0.15
Cdkn2bP55271 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC16.01■□□□□ 0.15
Cdkn2bP55271 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC16.01■□□□□ 0.15
Cdkn2bP55271 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC16■□□□□ 0.15
Cdkn2bP55271 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cdkn2bP55271 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cdkn2bP55271 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC16■□□□□ 0.15
Cdkn2bP55271 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Cdkn2bP55271 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC16■□□□□ 0.15
Cdkn2bP55271 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
Cdkn2bP55271 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Cdkn2bP55271 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cdkn2bP55271 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC16■□□□□ 0.15
Cdkn2bP55271 Gm15378-201ENSMUST00000121894 207 ntBASIC16■□□□□ 0.15
Cdkn2bP55271 Gm10698-201ENSMUST00000182663 604 ntBASIC16■□□□□ 0.15
Cdkn2bP55271 AC120002.2-201ENSMUST00000220205 773 ntBASIC16■□□□□ 0.15
Cdkn2bP55271 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cdkn2bP55271 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC16■□□□□ 0.15
Cdkn2bP55271 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC16■□□□□ 0.15
Cdkn2bP55271 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC16■□□□□ 0.15
Cdkn2bP55271 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cdkn2bP55271 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cdkn2bP55271 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Cdkn2bP55271 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC16■□□□□ 0.15
Cdkn2bP55271 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC16■□□□□ 0.15
Cdkn2bP55271 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC16■□□□□ 0.15
Cdkn2bP55271 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC16■□□□□ 0.15
Cdkn2bP55271 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Cdkn2bP55271 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC15.99■□□□□ 0.15
Cdkn2bP55271 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cdkn2bP55271 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cdkn2bP55271 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Cdkn2bP55271 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cdkn2bP55271 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cdkn2bP55271 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cdkn2bP55271 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms