Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC17.64■□□□□ 0.41
NcanP55066 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NcanP55066 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NcanP55066 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
NcanP55066 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NcanP55066 Gm43231-201ENSMUST00000202960 2258 ntBASIC17.64■□□□□ 0.41
NcanP55066 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
NcanP55066 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
NcanP55066 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
NcanP55066 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NcanP55066 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NcanP55066 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NcanP55066 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
NcanP55066 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NcanP55066 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NcanP55066 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NcanP55066 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
NcanP55066 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
NcanP55066 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NcanP55066 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NcanP55066 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NcanP55066 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
NcanP55066 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NcanP55066 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
NcanP55066 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NcanP55066 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NcanP55066 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NcanP55066 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
NcanP55066 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NcanP55066 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NcanP55066 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NcanP55066 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NcanP55066 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NcanP55066 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NcanP55066 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NcanP55066 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NcanP55066 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NcanP55066 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NcanP55066 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC17.62■□□□□ 0.41
NcanP55066 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC17.62■□□□□ 0.41
NcanP55066 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC17.62■□□□□ 0.41
NcanP55066 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC17.62■□□□□ 0.41
NcanP55066 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NcanP55066 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NcanP55066 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NcanP55066 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
NcanP55066 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NcanP55066 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
NcanP55066 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
NcanP55066 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
NcanP55066 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NcanP55066 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NcanP55066 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
NcanP55066 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NcanP55066 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
NcanP55066 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NcanP55066 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NcanP55066 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC17.61■□□□□ 0.41
NcanP55066 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
NcanP55066 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NcanP55066 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NcanP55066 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
NcanP55066 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
NcanP55066 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC17.61■□□□□ 0.41
NcanP55066 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
NcanP55066 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NcanP55066 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC17.61■□□□□ 0.41
NcanP55066 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC17.61■□□□□ 0.41
NcanP55066 AA543401-201ENSMUST00000164248 1269 ntBASIC17.61■□□□□ 0.41
NcanP55066 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC17.61■□□□□ 0.41
NcanP55066 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NcanP55066 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NcanP55066 Gm15500-202ENSMUST00000071641 1019 ntBASIC17.61■□□□□ 0.41
NcanP55066 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC17.61■□□□□ 0.41
NcanP55066 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NcanP55066 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NcanP55066 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
NcanP55066 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NcanP55066 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
NcanP55066 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NcanP55066 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
NcanP55066 Gm20949-201ENSMUST00000206478 952 ntBASIC17.6■□□□□ 0.41
NcanP55066 AC174742.1-201ENSMUST00000218272 304 ntBASIC17.6■□□□□ 0.41
NcanP55066 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NcanP55066 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NcanP55066 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NcanP55066 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NcanP55066 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
NcanP55066 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NcanP55066 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NcanP55066 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
NcanP55066 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NcanP55066 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC17.59■□□□□ 0.41
NcanP55066 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC17.59■□□□□ 0.41
NcanP55066 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
NcanP55066 Gm45203-201ENSMUST00000206384 1831 ntBASIC17.59■□□□□ 0.41
NcanP55066 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
NcanP55066 Gm9889-202ENSMUST00000206983 1577 ntBASIC17.59■□□□□ 0.41
NcanP55066 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
NcanP55066 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC17.59■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 70.8 ms