Protein–RNA interactions for Protein: P43407

Sdc2, Syndecan-2, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc2P43407 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Sdc2P43407 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
Sdc2P43407 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Sdc2P43407 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sdc2P43407 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC18.76■□□□□ 0.59
Sdc2P43407 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sdc2P43407 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Sdc2P43407 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC18.76■□□□□ 0.59
Sdc2P43407 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sdc2P43407 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sdc2P43407 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sdc2P43407 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sdc2P43407 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sdc2P43407 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sdc2P43407 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sdc2P43407 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sdc2P43407 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC18.76■□□□□ 0.59
Sdc2P43407 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC18.76■□□□□ 0.59
Sdc2P43407 Gm16042-201ENSMUST00000204813 1247 ntBASIC18.76■□□□□ 0.59
Sdc2P43407 AC120002.2-201ENSMUST00000220205 773 ntBASIC18.76■□□□□ 0.59
Sdc2P43407 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Sdc2P43407 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sdc2P43407 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Sdc2P43407 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Sdc2P43407 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Sdc2P43407 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sdc2P43407 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Sdc2P43407 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sdc2P43407 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC18.76■□□□□ 0.59
Sdc2P43407 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Sdc2P43407 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sdc2P43407 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sdc2P43407 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Sdc2P43407 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sdc2P43407 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC18.75■□□□□ 0.59
Sdc2P43407 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sdc2P43407 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sdc2P43407 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Sdc2P43407 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sdc2P43407 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sdc2P43407 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Sdc2P43407 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC18.75■□□□□ 0.59
Sdc2P43407 Il3ra-202ENSMUST00000223589 738 ntBASIC18.75■□□□□ 0.59
Sdc2P43407 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sdc2P43407 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC18.75■□□□□ 0.59
Sdc2P43407 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sdc2P43407 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
Sdc2P43407 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sdc2P43407 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC18.75■□□□□ 0.59
Sdc2P43407 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sdc2P43407 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sdc2P43407 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sdc2P43407 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sdc2P43407 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sdc2P43407 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sdc2P43407 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sdc2P43407 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Sdc2P43407 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Sdc2P43407 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC18.74■□□□□ 0.59
Sdc2P43407 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Sdc2P43407 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Sdc2P43407 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sdc2P43407 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sdc2P43407 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Sdc2P43407 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sdc2P43407 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sdc2P43407 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sdc2P43407 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC18.74■□□□□ 0.59
Sdc2P43407 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sdc2P43407 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC18.74■□□□□ 0.59
Sdc2P43407 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Sdc2P43407 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Sdc2P43407 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
Sdc2P43407 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sdc2P43407 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sdc2P43407 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC18.73■□□□□ 0.59
Sdc2P43407 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC18.73■□□□□ 0.59
Sdc2P43407 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC18.73■□□□□ 0.59
Sdc2P43407 AC153881.1-201ENSMUST00000214448 284 ntBASIC18.73■□□□□ 0.59
Sdc2P43407 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sdc2P43407 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Sdc2P43407 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sdc2P43407 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Sdc2P43407 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sdc2P43407 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sdc2P43407 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC18.73■□□□□ 0.59
Sdc2P43407 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sdc2P43407 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Sdc2P43407 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sdc2P43407 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sdc2P43407 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sdc2P43407 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sdc2P43407 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sdc2P43407 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Sdc2P43407 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sdc2P43407 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Sdc2P43407 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Sdc2P43407 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sdc2P43407 AC154649.1-201ENSMUST00000227392 384 ntBASIC18.72■□□□□ 0.59
Sdc2P43407 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms