Protein–RNA interactions for Protein: P43028

Gdf6, Growth/differentiation factor 6, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gdf6P43028 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gdf6P43028 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Gdf6P43028 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gdf6P43028 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.56■□□□□ 0.4
Gdf6P43028 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gdf6P43028 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gdf6P43028 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gdf6P43028 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Gdf6P43028 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gdf6P43028 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
Gdf6P43028 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gdf6P43028 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC17.55■□□□□ 0.4
Gdf6P43028 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.55■□□□□ 0.4
Gdf6P43028 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC17.55■□□□□ 0.4
Gdf6P43028 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Gdf6P43028 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC17.55■□□□□ 0.4
Gdf6P43028 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Gdf6P43028 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Gdf6P43028 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gdf6P43028 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gdf6P43028 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gdf6P43028 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gdf6P43028 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Gdf6P43028 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gdf6P43028 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Gdf6P43028 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gdf6P43028 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.55■□□□□ 0.4
Gdf6P43028 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gdf6P43028 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gdf6P43028 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gdf6P43028 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gdf6P43028 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.54■□□□□ 0.4
Gdf6P43028 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gdf6P43028 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gdf6P43028 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Gdf6P43028 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gdf6P43028 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gdf6P43028 Gm24589-201ENSMUST00000116692 94 ntBASIC17.54■□□□□ 0.4
Gdf6P43028 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gdf6P43028 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gdf6P43028 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gdf6P43028 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gdf6P43028 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Gdf6P43028 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gdf6P43028 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Gdf6P43028 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gdf6P43028 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Gdf6P43028 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gdf6P43028 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Gdf6P43028 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC17.53■□□□□ 0.4
Gdf6P43028 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC17.53■□□□□ 0.4
Gdf6P43028 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC17.53■□□□□ 0.4
Gdf6P43028 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gdf6P43028 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gdf6P43028 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gdf6P43028 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gdf6P43028 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gdf6P43028 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Gdf6P43028 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gdf6P43028 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gdf6P43028 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Gdf6P43028 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Gdf6P43028 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Gdf6P43028 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Gdf6P43028 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Gdf6P43028 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Gdf6P43028 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Gdf6P43028 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Gdf6P43028 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC17.52■□□□□ 0.4
Gdf6P43028 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Gdf6P43028 Gm12895-201ENSMUST00000122214 226 ntBASIC17.52■□□□□ 0.4
Gdf6P43028 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Gdf6P43028 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Gdf6P43028 Gm34391-201ENSMUST00000203706 907 ntBASIC17.52■□□□□ 0.4
Gdf6P43028 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC17.52■□□□□ 0.4
Gdf6P43028 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Gdf6P43028 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC17.52■□□□□ 0.4
Gdf6P43028 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Gdf6P43028 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Gdf6P43028 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
Gdf6P43028 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.52■□□□□ 0.4
Gdf6P43028 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Gdf6P43028 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Gdf6P43028 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC17.52■□□□□ 0.39
Gdf6P43028 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Gdf6P43028 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Gdf6P43028 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Gdf6P43028 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Gdf6P43028 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.51■□□□□ 0.39
Gdf6P43028 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
Gdf6P43028 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC17.51■□□□□ 0.39
Gdf6P43028 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gdf6P43028 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Gdf6P43028 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gdf6P43028 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gdf6P43028 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gdf6P43028 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gdf6P43028 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.51■□□□□ 0.39
Gdf6P43028 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gdf6P43028 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms