Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cxcl12P40224 Gm15920-201ENSMUST00000118998 402 ntBASIC17.23■□□□□ 0.35
Cxcl12P40224 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cxcl12P40224 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC17.23■□□□□ 0.35
Cxcl12P40224 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC17.23■□□□□ 0.35
Cxcl12P40224 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Cxcl12P40224 AC114585.2-202ENSMUST00000228094 426 ntBASIC17.23■□□□□ 0.35
Cxcl12P40224 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cxcl12P40224 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cxcl12P40224 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Cxcl12P40224 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Cxcl12P40224 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cxcl12P40224 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cxcl12P40224 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Cxcl12P40224 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Cxcl12P40224 Gm35558-201ENSMUST00000222675 2219 ntBASIC17.23■□□□□ 0.35
Cxcl12P40224 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Cxcl12P40224 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC17.22■□□□□ 0.35
Cxcl12P40224 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Cxcl12P40224 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Cxcl12P40224 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cxcl12P40224 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
Cxcl12P40224 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cxcl12P40224 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
Cxcl12P40224 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
Cxcl12P40224 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC17.22■□□□□ 0.35
Cxcl12P40224 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cxcl12P40224 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cxcl12P40224 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Cxcl12P40224 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cxcl12P40224 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cxcl12P40224 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cxcl12P40224 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cxcl12P40224 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cxcl12P40224 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cxcl12P40224 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cxcl12P40224 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cxcl12P40224 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Cxcl12P40224 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Cxcl12P40224 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cxcl12P40224 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cxcl12P40224 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Cxcl12P40224 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Cxcl12P40224 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cxcl12P40224 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Cxcl12P40224 Gm14057-201ENSMUST00000120631 482 ntBASIC17.21■□□□□ 0.35
Cxcl12P40224 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Cxcl12P40224 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC17.21■□□□□ 0.35
Cxcl12P40224 Bloc1s5-203ENSMUST00000224902 612 ntBASIC17.21■□□□□ 0.35
Cxcl12P40224 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cxcl12P40224 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cxcl12P40224 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cxcl12P40224 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Cxcl12P40224 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cxcl12P40224 Gm37500-201ENSMUST00000192059 1443 ntBASIC17.21■□□□□ 0.34
Cxcl12P40224 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.34
Cxcl12P40224 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Cxcl12P40224 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Cxcl12P40224 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Cxcl12P40224 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Cxcl12P40224 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cxcl12P40224 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cxcl12P40224 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Cxcl12P40224 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC17.2■□□□□ 0.34
Cxcl12P40224 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cxcl12P40224 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Cxcl12P40224 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC17.2■□□□□ 0.34
Cxcl12P40224 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC17.2■□□□□ 0.34
Cxcl12P40224 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Cxcl12P40224 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC17.2■□□□□ 0.34
Cxcl12P40224 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC17.2■□□□□ 0.34
Cxcl12P40224 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC17.2■□□□□ 0.34
Cxcl12P40224 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cxcl12P40224 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cxcl12P40224 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cxcl12P40224 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cxcl12P40224 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Cxcl12P40224 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cxcl12P40224 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cxcl12P40224 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cxcl12P40224 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cxcl12P40224 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Cxcl12P40224 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cxcl12P40224 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Cxcl12P40224 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cxcl12P40224 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cxcl12P40224 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cxcl12P40224 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cxcl12P40224 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Cxcl12P40224 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cxcl12P40224 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cxcl12P40224 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Cxcl12P40224 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Cxcl12P40224 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC17.19■□□□□ 0.34
Cxcl12P40224 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC17.19■□□□□ 0.34
Cxcl12P40224 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cxcl12P40224 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cxcl12P40224 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cxcl12P40224 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cxcl12P40224 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms