Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Fen1P39749 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Fen1P39749 Rab3c-203ENSMUST00000224180 967 ntBASIC16.87■□□□□ 0.29
Fen1P39749 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Fen1P39749 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Fen1P39749 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC16.87■□□□□ 0.29
Fen1P39749 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Fen1P39749 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Fen1P39749 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Fen1P39749 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Fen1P39749 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Fen1P39749 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Fen1P39749 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC16.87■□□□□ 0.29
Fen1P39749 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Fen1P39749 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Fen1P39749 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Fen1P39749 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Fen1P39749 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Fen1P39749 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Fen1P39749 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Fen1P39749 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Fen1P39749 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC16.86■□□□□ 0.29
Fen1P39749 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Fen1P39749 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Fen1P39749 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Fen1P39749 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Fen1P39749 Gm10654-201ENSMUST00000098653 1633 ntBASIC16.86■□□□□ 0.29
Fen1P39749 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC16.86■□□□□ 0.29
Fen1P39749 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
Fen1P39749 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Fen1P39749 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Fen1P39749 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC16.86■□□□□ 0.29
Fen1P39749 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Fen1P39749 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Fen1P39749 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC16.86■□□□□ 0.29
Fen1P39749 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC16.85■□□□□ 0.29
Fen1P39749 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Fen1P39749 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Fen1P39749 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Fen1P39749 Gm8839-201ENSMUST00000121279 1645 ntBASIC16.85■□□□□ 0.29
Fen1P39749 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Fen1P39749 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Fen1P39749 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Fen1P39749 Gm36858-201ENSMUST00000194501 2391 ntBASIC16.85■□□□□ 0.29
Fen1P39749 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Fen1P39749 Gm13148-201ENSMUST00000118892 745 ntBASIC16.85■□□□□ 0.29
Fen1P39749 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Fen1P39749 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Fen1P39749 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Fen1P39749 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Fen1P39749 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Fen1P39749 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC16.84■□□□□ 0.29
Fen1P39749 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Fen1P39749 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
Fen1P39749 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Fen1P39749 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Fen1P39749 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Fen1P39749 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Fen1P39749 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Fen1P39749 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Fen1P39749 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Fen1P39749 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Fen1P39749 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Fen1P39749 Gm5408-201ENSMUST00000197998 747 ntBASIC16.84■□□□□ 0.29
Fen1P39749 Gm44672-201ENSMUST00000206944 1098 ntBASIC16.84■□□□□ 0.29
Fen1P39749 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC16.84■□□□□ 0.29
Fen1P39749 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Fen1P39749 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Fen1P39749 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Fen1P39749 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Fen1P39749 Tfap2a-209ENSMUST00000225180 1828 ntBASIC16.84■□□□□ 0.29
Fen1P39749 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Fen1P39749 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Fen1P39749 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Fen1P39749 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Fen1P39749 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
Fen1P39749 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC16.84■□□□□ 0.29
Fen1P39749 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Fen1P39749 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Fen1P39749 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Fen1P39749 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Fen1P39749 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Fen1P39749 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Fen1P39749 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
Fen1P39749 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Fen1P39749 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Fen1P39749 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC16.83■□□□□ 0.28
Fen1P39749 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC16.83■□□□□ 0.28
Fen1P39749 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC16.83■□□□□ 0.28
Fen1P39749 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Fen1P39749 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC16.83■□□□□ 0.28
Fen1P39749 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Fen1P39749 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Fen1P39749 Ptprs-211ENSMUST00000223859 5588 ntBASIC16.83■□□□□ 0.28
Fen1P39749 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Fen1P39749 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Fen1P39749 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Fen1P39749 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Fen1P39749 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Fen1P39749 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms