Protein–RNA interactions for Protein: P38060

Hmgcl, Hydroxymethylglutaryl-CoA lyase, mitochondrial, mousemouse

Predictions only

Length 325 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HmgclP38060 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
HmgclP38060 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HmgclP38060 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
HmgclP38060 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HmgclP38060 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HmgclP38060 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC16.48■□□□□ 0.23
HmgclP38060 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
HmgclP38060 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC16.48■□□□□ 0.23
HmgclP38060 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HmgclP38060 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
HmgclP38060 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
HmgclP38060 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
HmgclP38060 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
HmgclP38060 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
HmgclP38060 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
HmgclP38060 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
HmgclP38060 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
HmgclP38060 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC16.47■□□□□ 0.23
HmgclP38060 AC134329.2-201ENSMUST00000217897 428 ntBASIC16.47■□□□□ 0.23
HmgclP38060 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HmgclP38060 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HmgclP38060 Gm9987-201ENSMUST00000069768 567 ntBASIC16.47■□□□□ 0.23
HmgclP38060 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HmgclP38060 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
HmgclP38060 Gfra2-202ENSMUST00000227633 1480 ntBASIC16.47■□□□□ 0.23
HmgclP38060 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
HmgclP38060 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HmgclP38060 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HmgclP38060 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HmgclP38060 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HmgclP38060 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HmgclP38060 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
HmgclP38060 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC16.46■□□□□ 0.23
HmgclP38060 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
HmgclP38060 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC16.46■□□□□ 0.23
HmgclP38060 Gm26039-201ENSMUST00000158152 144 ntBASIC16.46■□□□□ 0.23
HmgclP38060 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HmgclP38060 Gm44450-201ENSMUST00000199528 114 ntBASIC16.46■□□□□ 0.23
HmgclP38060 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HmgclP38060 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HmgclP38060 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HmgclP38060 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC16.46■□□□□ 0.23
HmgclP38060 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HmgclP38060 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
HmgclP38060 AC154231.1-201ENSMUST00000220564 2175 ntBASIC16.45■□□□□ 0.22
HmgclP38060 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HmgclP38060 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC16.45■□□□□ 0.22
HmgclP38060 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HmgclP38060 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
HmgclP38060 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HmgclP38060 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HmgclP38060 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HmgclP38060 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
HmgclP38060 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HmgclP38060 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
HmgclP38060 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
HmgclP38060 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC16.45■□□□□ 0.22
HmgclP38060 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HmgclP38060 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
HmgclP38060 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC16.45■□□□□ 0.22
HmgclP38060 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
HmgclP38060 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HmgclP38060 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HmgclP38060 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HmgclP38060 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HmgclP38060 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HmgclP38060 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC16.45■□□□□ 0.22
HmgclP38060 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HmgclP38060 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC16.44■□□□□ 0.22
HmgclP38060 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HmgclP38060 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HmgclP38060 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
HmgclP38060 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HmgclP38060 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
HmgclP38060 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HmgclP38060 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HmgclP38060 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
HmgclP38060 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HmgclP38060 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HmgclP38060 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HmgclP38060 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HmgclP38060 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC16.44■□□□□ 0.22
HmgclP38060 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HmgclP38060 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HmgclP38060 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HmgclP38060 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HmgclP38060 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
HmgclP38060 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HmgclP38060 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
HmgclP38060 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
HmgclP38060 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
HmgclP38060 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HmgclP38060 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HmgclP38060 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HmgclP38060 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HmgclP38060 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
HmgclP38060 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC16.43■□□□□ 0.22
HmgclP38060 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
HmgclP38060 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
HmgclP38060 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms