Protein–RNA interactions for Protein: P35710

Sox5, Transcription factor SOX-5, mousemouse

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox5P35710 Gm10698-201ENSMUST00000182663 604 ntBASIC18.28■□□□□ 0.52
Sox5P35710 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Sox5P35710 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sox5P35710 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Sox5P35710 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Sox5P35710 Gm45203-201ENSMUST00000206384 1831 ntBASIC18.28■□□□□ 0.52
Sox5P35710 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sox5P35710 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sox5P35710 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sox5P35710 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sox5P35710 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sox5P35710 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Sox5P35710 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Sox5P35710 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sox5P35710 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sox5P35710 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sox5P35710 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sox5P35710 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sox5P35710 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC18.27■□□□□ 0.52
Sox5P35710 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Sox5P35710 Gm44878-201ENSMUST00000205812 1295 ntBASIC18.27■□□□□ 0.52
Sox5P35710 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sox5P35710 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Sox5P35710 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sox5P35710 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sox5P35710 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sox5P35710 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sox5P35710 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sox5P35710 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
Sox5P35710 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
Sox5P35710 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Sox5P35710 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Sox5P35710 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sox5P35710 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sox5P35710 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sox5P35710 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sox5P35710 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sox5P35710 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Sox5P35710 Gm15378-201ENSMUST00000121894 207 ntBASIC18.26■□□□□ 0.51
Sox5P35710 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC18.26■□□□□ 0.51
Sox5P35710 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sox5P35710 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sox5P35710 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sox5P35710 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Sox5P35710 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sox5P35710 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sox5P35710 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Sox5P35710 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sox5P35710 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Sox5P35710 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Sox5P35710 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Sox5P35710 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Sox5P35710 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sox5P35710 Gm12085-201ENSMUST00000119263 940 ntBASIC18.25■□□□□ 0.51
Sox5P35710 Gm7638-201ENSMUST00000121348 967 ntBASIC18.25■□□□□ 0.51
Sox5P35710 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC18.25■□□□□ 0.51
Sox5P35710 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC18.25■□□□□ 0.51
Sox5P35710 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Sox5P35710 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Sox5P35710 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sox5P35710 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sox5P35710 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sox5P35710 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Sox5P35710 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sox5P35710 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sox5P35710 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Sox5P35710 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sox5P35710 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sox5P35710 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sox5P35710 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sox5P35710 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Sox5P35710 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Sox5P35710 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
Sox5P35710 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sox5P35710 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Sox5P35710 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sox5P35710 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sox5P35710 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sox5P35710 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sox5P35710 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC18.24■□□□□ 0.51
Sox5P35710 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sox5P35710 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC18.24■□□□□ 0.51
Sox5P35710 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC18.24■□□□□ 0.51
Sox5P35710 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC18.24■□□□□ 0.51
Sox5P35710 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sox5P35710 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sox5P35710 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Sox5P35710 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sox5P35710 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sox5P35710 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sox5P35710 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sox5P35710 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sox5P35710 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC18.23■□□□□ 0.51
Sox5P35710 Il3ra-202ENSMUST00000223589 738 ntBASIC18.23■□□□□ 0.51
Sox5P35710 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sox5P35710 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Sox5P35710 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Sox5P35710 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Sox5P35710 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Sox5P35710 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms