Protein–RNA interactions for Protein: P20334

Tnfrsf9, Tumor necrosis factor receptor superfamily member 9, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf9P20334 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfrsf9P20334 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfrsf9P20334 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfrsf9P20334 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfrsf9P20334 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfrsf9P20334 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfrsf9P20334 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfrsf9P20334 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfrsf9P20334 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfrsf9P20334 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC13.61□□□□□ -0.23
Tnfrsf9P20334 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Tnfrsf9P20334 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Tnfrsf9P20334 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Tnfrsf9P20334 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfrsf9P20334 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfrsf9P20334 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfrsf9P20334 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfrsf9P20334 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC13.61□□□□□ -0.23
Tnfrsf9P20334 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC13.61□□□□□ -0.23
Tnfrsf9P20334 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfrsf9P20334 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfrsf9P20334 Gm5867-201ENSMUST00000063197 592 ntBASIC13.61□□□□□ -0.23
Tnfrsf9P20334 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfrsf9P20334 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfrsf9P20334 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfrsf9P20334 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfrsf9P20334 Gm5828-201ENSMUST00000071842 1860 ntBASIC13.61□□□□□ -0.23
Tnfrsf9P20334 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfrsf9P20334 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfrsf9P20334 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfrsf9P20334 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfrsf9P20334 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Tnfrsf9P20334 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfrsf9P20334 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfrsf9P20334 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfrsf9P20334 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC13.6□□□□□ -0.23
Tnfrsf9P20334 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Tnfrsf9P20334 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfrsf9P20334 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
Tnfrsf9P20334 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfrsf9P20334 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfrsf9P20334 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfrsf9P20334 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfrsf9P20334 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC13.6□□□□□ -0.23
Tnfrsf9P20334 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfrsf9P20334 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfrsf9P20334 Gm4974-201ENSMUST00000209974 875 ntBASIC13.6□□□□□ -0.23
Tnfrsf9P20334 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfrsf9P20334 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfrsf9P20334 Gm7791-201ENSMUST00000219066 539 ntBASIC13.6□□□□□ -0.23
Tnfrsf9P20334 Gm7370-201ENSMUST00000219471 767 ntBASIC13.6□□□□□ -0.23
Tnfrsf9P20334 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfrsf9P20334 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfrsf9P20334 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Tnfrsf9P20334 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Tnfrsf9P20334 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfrsf9P20334 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfrsf9P20334 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfrsf9P20334 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfrsf9P20334 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tnfrsf9P20334 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tnfrsf9P20334 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tnfrsf9P20334 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tnfrsf9P20334 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Tnfrsf9P20334 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tnfrsf9P20334 Gm9194-201ENSMUST00000220749 1447 ntBASIC13.59□□□□□ -0.23
Tnfrsf9P20334 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tnfrsf9P20334 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tnfrsf9P20334 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC13.59□□□□□ -0.23
Tnfrsf9P20334 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC13.59□□□□□ -0.23
Tnfrsf9P20334 Gm25925-201ENSMUST00000158314 306 ntBASIC13.59□□□□□ -0.23
Tnfrsf9P20334 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Tnfrsf9P20334 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC13.59□□□□□ -0.23
Tnfrsf9P20334 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC13.59□□□□□ -0.23
Tnfrsf9P20334 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Tnfrsf9P20334 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tnfrsf9P20334 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tnfrsf9P20334 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tnfrsf9P20334 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tnfrsf9P20334 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tnfrsf9P20334 Gm38308-201ENSMUST00000194934 1809 ntBASIC13.59□□□□□ -0.23
Tnfrsf9P20334 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tnfrsf9P20334 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tnfrsf9P20334 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tnfrsf9P20334 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Tnfrsf9P20334 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Tnfrsf9P20334 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Tnfrsf9P20334 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Tnfrsf9P20334 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tnfrsf9P20334 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Tnfrsf9P20334 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tnfrsf9P20334 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tnfrsf9P20334 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tnfrsf9P20334 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC13.58□□□□□ -0.24
Tnfrsf9P20334 Mzt1-203ENSMUST00000227948 952 ntBASIC13.58□□□□□ -0.24
Tnfrsf9P20334 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tnfrsf9P20334 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Tnfrsf9P20334 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tnfrsf9P20334 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tnfrsf9P20334 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms